Factsheet for GSMUA_Achr10P00870_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	72.88	80.48
GSMUA_Achr8P02170_001	Banana	plastid	72.4	79.31
HORVU1Hr1G004690.3	Barley	mitochondrion, plastid	57.87	79.14
GSMUA_Achr6P15230_001	Banana	plastid	69.49	75.13
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	74.58	73.86
Os05t0110900-01	Rice	plasma membrane	69.25	72.41
GSMUA_Achr8P34290_001	Banana	plastid	69.25	72.41
HORVU3Hr1G115860.6	Barley	plastid	49.88	72.03
TraesCS1A01G031200.1	Wheat	plastid	69.98	71.71
TraesCS1D01G032600.1	Wheat	plastid	69.73	71.46
TraesCS7D01G518500.1	Wheat	cytosol	60.53	71.23
TraesCS7B01G448200.1	Wheat	cytosol	61.02	71.19
EES18885	Sorghum	plastid	69.73	71.11
TraesCS4D01G208400.1	Wheat	plastid	64.16	71.05
TraesCS1B01G038800.1	Wheat	plastid	69.49	71.04
GSMUA_Achr10P...	Banana	plastid	71.67	70.98
Os03t0274800-01	Rice	plasma membrane	64.16	70.86
TraesCS4A01G096900.1	Wheat	plastid	63.92	70.78
TraesCS4B01G207500.1	Wheat	plastid	63.68	70.51
HORVU4Hr1G059750.3	Barley	plastid	63.92	70.03
Solyc04g011520.2.1	Tomato	nucleus	65.86	69.04
Zm00001d011066_P004	Maize	plastid	69.01	68.84
PGSC0003DMT400071329	Potato	plastid	65.62	68.78
Os01t0973500-01	Rice	plasma membrane	67.8	68.63
EER92482	Sorghum	plastid	62.71	68.16
VIT_13s0019g01080.t01	Wine grape	plastid	65.86	67.33
TraesCS3A01G530200.1	Wheat	plastid	69.25	66.67
TraesCS3B01G600300.1	Wheat	plastid	69.01	66.43
TraesCS3D01G535700.1	Wheat	plastid	68.77	66.36
KRG99951	Soybean	plastid	65.38	65.85
KRG97912	Soybean	cytosol	61.26	65.54
VIT_08s0007g00420.t01	Wine grape	plastid	64.16	65.43
KRH73031	Soybean	plastid	61.74	65.05
Solyc10g084770.1.1	Tomato	cytosol, plastid	64.89	64.89
KRH49102	Soybean	plastid	64.16	64.63
KRH15105	Soybean	cytosol, nucleus	59.56	64.57
PGSC0003DMT400028591	Potato	plastid	64.16	64.16
KRH75643	Soybean	plastid	63.92	63.92
Zm00001d028613_P001	Maize	plastid	62.47	63.7
KRH65832	Soybean	plastid	62.95	62.8
Solyc09g010850.2.1	Tomato	cytosol, plastid	62.95	62.5
PGSC0003DMT400023009	Potato	cytosol, plastid	62.95	62.5
Solyc05g053930.2.1	Tomato	plastid	61.74	62.35
HORVU1Hr1G004590.1	Barley	cytosol, mitochondrion	53.27	61.45
TraesCS7B01G449500.1	Wheat	cytosol	49.64	59.08
TraesCS7A01G532700.1	Wheat	cytosol	51.82	58.95
TraesCS7D01G519800.1	Wheat	cytosol	48.91	55.19
GSMUA_Achr4P04920_001	Banana	plastid	51.33	54.92
GSMUA_Achr1P21600_001	Banana	plastid	54.0	54.0
GSMUA_Achr2P07470_001	Banana	plastid	53.03	52.64
GSMUA_Achr10P...	Banana	plastid	49.64	52.43
GSMUA_AchrUn_...	Banana	plastid	55.21	52.41
TraesCS7D01G519900.2	Wheat	plastid	51.09	51.97
GSMUA_Achr6P10640_001	Banana	plastid	50.12	51.24
GSMUA_Achr3P14810_001	Banana	plastid	51.33	51.08
GSMUA_Achr6P08550_001	Banana	plastid	48.18	51.03
GSMUA_Achr3P26530_001	Banana	plasma membrane	49.64	50.49
GSMUA_Achr2P11330_001	Banana	cytosol	42.37	50.29
GSMUA_Achr3P26960_001	Banana	plastid	46.25	50.13
GSMUA_Achr1P18020_001	Banana	plastid	51.82	49.88
KRH15106	Soybean	cytosol	1.94	47.06
GSMUA_Achr10P...	Banana	cytosol	56.17	40.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G00870_001	EnsemblPlants:GSMUA_Achr10P00870_001	EnsemblPlants:GSMUA_Achr10T00870_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0REB4	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF511	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029621B6	SEG:seg	:	:	:

Description

Protein kinase APK1A, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G00870_001]

Coordinates

chr10:-:1485927..1488849

Molecular Weight (calculated)

45642.6 Da

IEP (calculated)

10.185

GRAVY (calculated)

-0.410

Length

413 amino acids

Sequence
(BLAST)

001: MGNCWGAKVK AESHSHVVFA SVGNSKHGKR KGNVSSGSSS RMSASFMPLT PRSEGEILSS SNLKSFIFNE LRIATRNFRP DSVLGEGGFG SVFKGWIDEH
101: TFAAVKPGTG LVIAVKKLNQ DSFQGHREWL TEVNYLSQLS HPNLVKLIGY CLEDEQRLLV YEFMPRGSLE NHLFRRSSYY QALSWNLRMK IALGAAKGLA
201: FLHSDKAKVI YRDFKASNVL LDSNYNAKLS DFGLAKDGPS DDKSHVSTRV MGTYGYAAPE YLATGHLTCK SDVYSFGVVL LEMLTGQRAI DKKRPVTEHN
301: LVEWAKLYLT SKRKTIRILD SRLQGQYSPA GAQKAAALAL QCLSMQAKQR PPMDQVVTAL EQLQDAKDIS NNPQTTDPKS ANGHPRLPLR RSSQRVGDGK
401: VAHPRPLASP SLD

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.