Factsheet for GSMUA_Achr1P21600_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14370.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT1G14370.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P07470_001	Banana	plastid	76.27	75.72
VIT_01s0026g01880.t01	Wine grape	cytosol	70.46	69.29
HORVU4Hr1G075150.2	Barley	plastid	69.73	69.06
TraesCS4D01G286100.1	Wheat	plastid	69.98	68.65
TraesCS4B01G287300.1	Wheat	plastid	69.98	68.65
TraesCS4A01G016800.1	Wheat	plastid	69.98	68.65
KRH69316	Soybean	cytosol, plastid	67.31	67.64
KRH74810	Soybean	cytosol, plastid	67.31	67.64
EER92783	Sorghum	plastid	71.43	67.2
AT2G02800.1	Thale cress	plastid	68.77	66.67
Solyc01g010660.2.1	Tomato	plastid	67.55	66.59
KRH45870	Soybean	plastid	64.65	66.42
PGSC0003DMT400002280	Potato	plastid	67.31	66.35
Solyc05g007140.2.1	Tomato	plastid	67.31	66.19
Os10t0405100-02	Rice	plasma membrane	68.52	66.12
GSMUA_Achr6P10640_001	Banana	plastid	64.41	65.84
PGSC0003DMT400065801	Potato	plastid	66.83	65.71
Bra019654.1-P	Field mustard	cytosol, plastid	66.83	65.71
CDY39318	Canola	cytosol, plastid	66.59	65.32
CDY49086	Canola	cytosol, plastid	66.34	65.24
EER94269	Sorghum	plastid	68.28	65.13
Zm00001d048314_P001	Maize	cytosol, plastid	71.43	64.69
CDY45196	Canola	plastid	66.83	64.64
AT1G14370.1	Thale cress	plastid	66.34	64.32
KRG99134	Soybean	plastid	64.65	64.18
CDY67404	Canola	plastid	68.52	63.6
CDY53554	Canola	plastid	65.86	63.4
Zm00001d033004_P004	Maize	plastid	66.83	63.3
CDY41675	Canola	plastid	68.04	63.29
CDX81634	Canola	plastid	65.62	63.17
CDY52768	Canola	plastid	60.77	63.07
CDY38760	Canola	plastid	60.05	62.94
Bra016265.1-P	Field mustard	plastid	60.05	62.94
Bra026834.1-P	Field mustard	plastid	65.38	62.79
AT1G69790.1	Thale cress	plastid	58.84	62.79
CDY11655	Canola	plastid	59.81	62.69
CDY03036	Canola	plastid	67.07	62.67
AT1G26970.1	Thale cress	plastid	61.99	62.14
Bra016301.1-P	Field mustard	plastid	60.77	61.22
CDY46426	Canola	plastid	60.77	61.22
KRH56930	Soybean	cytosol	58.6	60.5
Bra026580.1-P	Field mustard	plastid	68.77	58.2
GSMUA_Achr8P34290_001	Banana	plastid	54.96	57.47
GSMUA_Achr11P...	Banana	cytosol	50.36	55.62
GSMUA_Achr6P15230_001	Banana	plastid	51.33	55.5
Solyc12g077390.1.1	Tomato	cytosol	55.21	54.42
GSMUA_Achr6P08550_001	Banana	plastid	51.09	54.1
GSMUA_Achr10P...	Banana	plastid	54.0	54.0
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	54.24	53.72
GSMUA_Achr10P...	Banana	cytosol	73.37	53.25
GSMUA_Achr10P...	Banana	plastid	50.36	53.2
GSMUA_Achr8P02170_001	Banana	plastid	47.7	52.25
GSMUA_Achr10P...	Banana	plastid	50.85	50.36
GSMUA_Achr4P04920_001	Banana	plastid	46.97	50.26
GSMUA_Achr3P14810_001	Banana	plastid	49.39	49.16
GSMUA_Achr2P11330_001	Banana	cytosol	41.16	48.85
GSMUA_Achr3P26530_001	Banana	plasma membrane	47.46	48.28
GSMUA_AchrUn_...	Banana	plastid	49.64	47.13
GSMUA_Achr1P18020_001	Banana	plastid	48.91	47.09
GSMUA_Achr3P26960_001	Banana	plastid	41.65	45.14
PGSC0003DMT400049853	Potato	plasma membrane	52.54	45.02

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr1G21600_001	EnsemblPlants:GSMUA_Achr1P21600_001	EnsemblPlants:GSMUA_Achr1T21600_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0S1W8
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF160	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294AFAF	SEG:seg	:	:	:

Description

Protein kinase 2B, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G21600_001]

Coordinates

chr1:+:16225249..16227364

Molecular Weight (calculated)

45518.5 Da

IEP (calculated)

10.323

GRAVY (calculated)

-0.512

Length

413 amino acids

Sequence
(BLAST)

001: MGNCFNCPSR VENSAHRASY PSNIGTSRRS VSSNLSAPSY KEKTGGALPA SRTEGEILSN SNLKAFTFND LRNATRNFRP DSLIGEGGFG YVYKGWINEQ
101: NFAPSKPGSG MVVAVKKLKP EGFQGHKEWL TEVNYLGQLH HPNLVKLIGY CSEGDNRLLV YEFMPKGSLE NHLFRRGAEP LPWATRIKVA IGAARGLSFL
201: NDESQIIYRD VKASNILLDT DFNAKLSDFG LAKDGPTGDK THVSTQVMGT HGYAAPEYIA TGRLSAKADV YSFGVVLLEL LTGRRALEKT KAGTEQSLVD
301: WAKPSLGDKR KLYRIMDPRL EGKYLKKGAH ELGILALQCI GKDAKRRPRM SEVLASLEKL QDSKFGALPP QATRPKTSST IPRSPMRNPP RSPLRPTPIG
401: SPLPSYRRSP HVY

Best Arabidopsis Sequence Match ( AT2G02800.1 )
(BLAST)

001: MGNCLDSSAK VDSSSHSPHA NSASLSSRVS SKTSRSTVPS SLSINSYSSV ESLPTPRTEG EILSSPNLKA FTFNELKNAT RNFRPDSLLG EGGFGYVFKG
101: WIDGTTLTAS KPGSGIVVAV KKLKTEGYQG HKEWLTEVNY LGQLSHPNLV KLVGYCVEGE NRLLVYEFMP KGSLENHLFR RGAQPLTWAI RMKVAIGAAK
201: GLTFLHDAKS QVIYRDFKAA NILLDAEFNS KLSDFGLAKA GPTGDKTHVS TQVMGTHGYA APEYVATGRL TAKSDVYSFG VVLLELLSGR RAVDKSKVGM
301: EQSLVDWATP YLGDKRKLFR IMDTRLGGQY PQKGAYTAAS LALQCLNPDA KLRPKMSEVL AKLDQLESTK PGTGVGNRQA QIDSPRGSNG SIVQKSPRRY
401: SYDRPLLHIT PGASPLPTHN HSPRVR

Arabidopsis Description

PBL3Probable serine/threonine-protein kinase PBL3 [Source:UniProtKB/Swiss-Prot;Acc:O49840]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.