Factsheet for Zm00001d033004_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14370.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT1G14370.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT1G14370.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT1G14370.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT1G14370.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT1G14370.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT1G14370.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT1G14370.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT1G14370.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT1G14370.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT1G14370.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT1G14370.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT1G14370.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT1G14370.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT1G14370.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT1G14370.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT1G14370.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT1G14370.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT1G14370.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT1G14370.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94269	Sorghum	plastid	92.2	92.84
Os10t0405100-02	Rice	plasma membrane	81.42	82.94
Zm00001d048314_P001	Maize	cytosol, plastid	73.85	70.61
VIT_01s0026g01880.t01	Wine grape	cytosol	66.74	69.29
KRH45870	Soybean	plastid	62.39	67.66
GSMUA_Achr1P21600_001	Banana	plastid	63.3	66.83
KRH74810	Soybean	cytosol, plastid	62.84	66.67
KRH69316	Soybean	cytosol, plastid	62.84	66.67
GSMUA_Achr2P07470_001	Banana	plastid	63.53	66.59
Solyc01g010660.2.1	Tomato	plastid	63.53	66.11
PGSC0003DMT400002280	Potato	plastid	63.07	65.63
KRG99134	Soybean	plastid	62.16	65.14
AT2G02800.1	Thale cress	plastid	63.07	64.55
Solyc05g007140.2.1	Tomato	plastid	62.16	64.52
CDY45196	Canola	plastid	63.07	64.4
PGSC0003DMT400065801	Potato	plastid	61.93	64.29
AT1G69790.1	Thale cress	plastid	56.88	64.08
CDY11655	Canola	plastid	57.8	63.96
CDY38760	Canola	plastid	57.8	63.96
Bra016265.1-P	Field mustard	plastid	57.8	63.96
AT1G26970.1	Thale cress	plastid	60.32	63.84
Bra019654.1-P	Field mustard	cytosol, plastid	61.47	63.81
CDY52768	Canola	plastid	58.03	63.57
CDY49086	Canola	cytosol, plastid	61.01	63.33
CDY39318	Canola	cytosol, plastid	61.01	63.18
CDY41675	Canola	plastid	63.99	62.84
CDY67404	Canola	plastid	63.99	62.7
CDY03036	Canola	plastid	63.07	62.22
GSMUA_Achr6P10640_001	Banana	plastid	57.57	62.13
CDY46426	Canola	plastid	58.03	61.71
CDY53554	Canola	plastid	60.55	61.54
Bra016301.1-P	Field mustard	plastid	57.8	61.46
CDX81634	Canola	plastid	60.32	61.31
AT1G14370.1	Thale cress	plastid	59.63	61.03
KRH56930	Soybean	cytosol	55.96	61.0
Bra026834.1-P	Field mustard	plastid	60.09	60.93
Bra026580.1-P	Field mustard	plastid	63.99	57.17
Zm00001d011066_P004	Maize	plastid	52.29	55.07
Solyc12g077390.1.1	Tomato	cytosol	52.75	54.89
Zm00001d028613_P001	Maize	plastid	50.23	54.07
Zm00001d022549_P001	Maize	plastid	47.94	53.87
Zm00001d034662_P001	Maize	plastid	50.0	52.03
Zm00001d012958_P001	Maize	plastid	49.77	51.91
Zm00001d045191_P001	Maize	mitochondrion	47.25	50.86
GSMUA_Achr10P...	Banana	cytosol	64.45	49.38
Zm00001d014850_P002	Maize	plastid	45.41	47.94
Zm00001d048342_P001	Maize	plastid	44.04	47.06
Zm00001d054014_P002	Maize	cytosol, plastid	45.64	46.28
Zm00001d026126_P001	Maize	plastid	47.94	45.83
PGSC0003DMT400049853	Potato	plasma membrane	50.23	45.44
Zm00001d015012_P001	Maize	plastid	46.79	45.03
Zm00001d027509_P002	Maize	cytosol	38.3	44.53
Zm00001d020213_P003	Maize	cytosol	49.77	43.06
Zm00001d005647_P002	Maize	cytosol	49.77	42.89
Zm00001d051424_P001	Maize	plastid	43.12	42.15
Zm00001d044324_P001	Maize	cytosol	47.25	41.04

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100273915	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:BT087664	UniProt:C4JA17
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
ProteinID:ONM06588.1	ProteinID:ONM06592.1	ProteinID:ONM06593.1	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF286	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A4BD2E	EnsemblPlantsGene:Zm00001d033004	EnsemblPlants:Zm00001d033004_P004
EnsemblPlants:Zm00001d033004_T004	SEG:seg	:	:	:	:

Description

Protein kinase 2B chloroplastic

Coordinates

chr1:-:246673838..246679239

Molecular Weight (calculated)

47380.3 Da

IEP (calculated)

10.188

GRAVY (calculated)

-0.480

Length

436 amino acids

Sequence
(BLAST)

001: MGNCMDKAVP VDNTSYQSKA GSKSISSSNP STVKTGSTRS TWTVASYKDS RELPTPRTEG EILSSPNLKA FSFGDLRTAS RNFRSDSLLG EGGFGYVFKG
101: WIDEQTLAPS KPGSGMVVAI KKLKPEGFQG HKEWLTEVDY LGQLHHQNLV KLIGYCTDGD HRLLVYEYMP KGSLENHLFR RGADPLSWGT RLKVAIGAAK
201: GLSFLHDAEN QVIYRDFKAS NILLDSEFNA KLSDFGLAKA GPTGDRTHVS TQVMGTRGYA APEYVATGRL SVKADVYSFG VVLLELLTGR RALDKSKPLT
301: EQNLVEWARP YLSDKRRLYR IMDSKLGGQY PKKGAHAVAG IALQCIRNEG KMRPAMSEVV EKLEQLQDPR YNVAAPPQVN TASSSSSSGS VVPRSPRKAQ
401: PSPRRLSGSA SPLPAPATGS PLPGSSRSSS RTAQVH

Best Arabidopsis Sequence Match ( AT1G14370.1 )
(BLAST)

001: MGNCLDSSAK VDNSNHSPHA NSASSGSKVS SKTSRSTGPS GLSTTSYSTD SSFGPLPTLR TEGEILSSPN LKAFTFNELK NATKNFRQDN LLGEGGFGCV
101: FKGWIDQTSL TASRPGSGIV VAVKQLKPEG FQGHKEWLTE VNYLGQLSHP NLVLLVGYCA EGENRLLVYE FMPKGSLENH LFRRGAQPLT WAIRMKVAVG
201: AAKGLTFLHE AKSQVIYRDF KAANILLDAD FNAKLSDFGL AKAGPTGDNT HVSTKVIGTH GYAAPEYVAT GRLTAKSDVY SFGVVLLELI SGRRAMDNSN
301: GGNEYSLVDW ATPYLGDKRK LFRIMDTKLG GQYPQKGAFT AANLALQCLN PDAKLRPKMS EVLVTLEQLE SVAKPGTKHT QMESPRFHHS SVMQKSPVRY
401: SHDRPLLHMT PGASPLPSYT QSPRVR

Arabidopsis Description

PBL2PBL2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI52]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.