Factsheet for Solyc12g077390.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049853	Potato	plasma membrane	80.19	69.71
Bra016265.1-P	Field mustard	plastid	55.37	58.88
CDY38760	Canola	plastid	55.37	58.88
Solyc05g007140.2.1	Tomato	plastid	58.95	58.81
CDY11655	Canola	plastid	55.13	58.63
Solyc01g010660.2.1	Tomato	plastid	58.23	58.23
AT1G69790.1	Thale cress	plastid	53.46	57.88
CDY52768	Canola	plastid	53.46	56.28
KRH56930	Soybean	cytosol	53.7	56.25
HORVU4Hr1G075150.2	Barley	plastid	55.85	56.12
Os10t0405100-02	Rice	plasma membrane	57.28	56.07
TraesCS4A01G016800.1	Wheat	plastid	56.09	55.82
TraesCS4B01G287300.1	Wheat	plastid	56.09	55.82
TraesCS4D01G286100.1	Wheat	plastid	56.09	55.82
GSMUA_Achr1P21600_001	Banana	plastid	54.42	55.21
AT1G26970.1	Thale cress	plastid	53.94	54.85
EER92783	Sorghum	plastid	57.04	54.44
CDY46426	Canola	plastid	52.98	54.15
Bra016301.1-P	Field mustard	plastid	52.98	54.15
GSMUA_Achr2P07470_001	Banana	plastid	53.22	53.61
Solyc04g011520.2.1	Tomato	nucleus	49.88	53.05
Zm00001d033004_P004	Maize	plastid	54.89	52.75
EER94269	Sorghum	plastid	54.42	52.66
GSMUA_Achr6P10640_001	Banana	plastid	50.36	52.23
Solyc06g005500.2.1	Tomato	nucleus	50.6	52.09
Zm00001d048314_P001	Maize	cytosol, plastid	56.32	51.75
Solyc01g008870.1.1	Tomato	plastid	46.06	51.47
Solyc11g062400.1.1	Tomato	plastid	47.26	50.0
Solyc10g084770.1.1	Tomato	cytosol, plastid	48.69	49.39
Solyc05g053930.2.1	Tomato	plastid	48.21	49.39
Solyc09g010850.2.1	Tomato	cytosol, plastid	48.21	48.56
Solyc01g112220.2.1	Tomato	plastid	43.91	44.88
Solyc03g032150.2.1	Tomato	plastid	44.39	44.5
Solyc01g008860.1.1	Tomato	plastid	43.2	44.15
Solyc07g007980.2.1	Tomato	nucleus	45.58	43.41
Solyc04g082500.2.1	Tomato	nucleus	42.72	43.34
Solyc02g087830.2.1	Tomato	plastid	41.53	42.65
GSMUA_Achr10P...	Banana	cytosol	56.8	41.83
Solyc05g007050.2.1	Tomato	cytosol	46.78	41.0
Solyc01g010780.2.1	Tomato	cytosol	45.82	39.92

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4DGG1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF160	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g077390.1	EnsemblPlants:Solyc12g077390.1.1	UniParc:UPI000276A6B2	:

Description

No Description!

Coordinates

chr12:-:18845982..18848013

Molecular Weight (calculated)

46208.5 Da

IEP (calculated)

9.771

GRAVY (calculated)

-0.343

Length

419 amino acids

Sequence
(BLAST)

001: MGNWITCCVR ARDQVAGIPN AGTLTFPTST EFSYYSGGTD WSHPLPVPNQ NCTRKKRTGI VPSQRSESEI LSSPYLRALL LSELTKATTN FHSDCLLGEG
101: GFGYVYKGWL CKNTLTAAAP GSGLGVAVKK LKPRGLQGHK EWLSEVNYLG QLHHPNLVKL IGFCLEGENR LLVYEFMPRG SLENHLFPKS APVLPWATRI
201: KVAIAAARGL SFLHDAEPQV IYRDFKASNI LLDSEFNAKL SDFGLAKSGP TGDHSHVSTQ VMGTQGYTAP EYLATGKLTA KCDVYSFGVV LLELLTGRRV
301: MDKRKAGAEQ NLIEWATPYL HDKKKLFRIM DTKLEGQYPR KAATIAATLA LHCVHPEAKG RPDMSFVLSA LEQLPSKYMS GRQYGDQKKM SKSRHKSEST
401: FPGSVRTKHA SRVSEDNAS

Best Arabidopsis Sequence Match ( AT1G14370.1 )
(BLAST)

001: MGNCLDSSAK VDNSNHSPHA NSASSGSKVS SKTSRSTGPS GLSTTSYSTD SSFGPLPTLR TEGEILSSPN LKAFTFNELK NATKNFRQDN LLGEGGFGCV
101: FKGWIDQTSL TASRPGSGIV VAVKQLKPEG FQGHKEWLTE VNYLGQLSHP NLVLLVGYCA EGENRLLVYE FMPKGSLENH LFRRGAQPLT WAIRMKVAVG
201: AAKGLTFLHE AKSQVIYRDF KAANILLDAD FNAKLSDFGL AKAGPTGDNT HVSTKVIGTH GYAAPEYVAT GRLTAKSDVY SFGVVLLELI SGRRAMDNSN
301: GGNEYSLVDW ATPYLGDKRK LFRIMDTKLG GQYPQKGAFT AANLALQCLN PDAKLRPKMS EVLVTLEQLE SVAKPGTKHT QMESPRFHHS SVMQKSPVRY
401: SHDRPLLHMT PGASPLPSYT QSPRVR

Arabidopsis Description

PBL2PBL2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI52]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.