Factsheet for Solyc01g008870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g008860.1.1	Tomato	plastid	83.2	76.1
Solyc11g062400.1.1	Tomato	plastid	76.0	71.97
VIT_06s0009g01810.t01	Wine grape	plastid	66.93	62.28
KRH18652	Soybean	plastid	62.67	61.52
KRH14658	Soybean	plastid	62.67	60.41
GSMUA_Achr6P08550_001	Banana	plastid	60.0	57.69
Os07t0686800-01	Rice	plasma membrane, plastid	53.07	56.7
GSMUA_Achr10P...	Banana	plastid	58.93	56.52
Zm00001d022549_P001	Maize	plastid	55.73	53.87
Solyc01g010660.2.1	Tomato	plastid	59.73	53.46
KRG89785	Soybean	plasma membrane, vacuole	60.27	53.18
Solyc05g007140.2.1	Tomato	plastid	57.87	51.67
TraesCS2B01G114900.1	Wheat	plastid	55.73	50.98
EER99941	Sorghum	plastid	55.47	50.86
TraesCS2D01G098200.1	Wheat	plastid	55.47	50.86
TraesCS2A01G098700.1	Wheat	plastid	55.47	50.86
Solyc10g084770.1.1	Tomato	cytosol, plastid	54.67	49.64
Solyc04g011520.2.1	Tomato	nucleus	51.47	48.98
Solyc06g005500.2.1	Tomato	nucleus	53.07	48.89
Solyc09g010850.2.1	Tomato	cytosol, plastid	53.07	47.84
Solyc05g053930.2.1	Tomato	plastid	52.0	47.68
Solyc12g077390.1.1	Tomato	cytosol	51.47	46.06
Solyc03g032150.2.1	Tomato	plastid	49.6	44.5
Solyc04g082500.2.1	Tomato	nucleus	48.0	43.58
Solyc07g007980.2.1	Tomato	nucleus	50.93	43.41
Solyc01g112220.2.1	Tomato	plastid	47.2	43.17
Solyc02g087830.2.1	Tomato	plastid	46.67	42.89
Solyc05g007050.2.1	Tomato	cytosol	53.33	41.84
Solyc01g010780.2.1	Tomato	cytosol	52.0	40.54
HORVU2Hr1G016720.2	Barley	mitochondrion	53.6	38.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4AT83	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF99	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc01g008870.1	EnsemblPlants:Solyc01g008870.1.1	UniParc:UPI0002763321	SEG:seg

Description

No Description!

Coordinates

chr1:-:2892754..2895697

Molecular Weight (calculated)

41293.3 Da

IEP (calculated)

9.299

GRAVY (calculated)

-0.270

Length

375 amino acids

Sequence
(BLAST)

001: MGNCSGKSSK LAHASSSLIF DSNSGSSRSV KREQFHSHKQ SFHNSFRAND SFVPSNLKSF TFNELKNATR NFRADSLLGE GGFGYVFKGW IDETTFAPCK
101: PGSGMVVAVK KLKPESFQGH REWLAEVNYL GLLHHENLVR LIGYCAEFDN RLLVYEVMSK GSLENHLFKK GVQTIPWATR MCIAVDVARG LSFLHGLEAN
201: VIYRDLKASN ILLDSVSSPK TEMDFNAKLS DFGLARDGPS GDRTHVSTRI VGTTGYAAPE YLASGHLTPK NDVYSFGVVL LELLSGKRAT SAENAGGADE
301: KLVEWAKPFL CDSRRVLRIM DTRLGGQYSK KGAQTAASLV LRCLNVDPRL RPTMDEVLAT LELVQAPKDV MKSSQ

Best Arabidopsis Sequence Match ( AT1G69790.1 )
(BLAST)

001: MGNCLDSSAR VGNRESTFGG SSRISRKPNQ SSRLSSLTIP SYSNNSFTTS SWSNLTPRSE GELLPSPTLK AFTFNELKTA TRNFKPNSMI GEGGFGCVYK
101: GWIGERSLSP SKPGSGMVVA VKKLKSEGFQ GHKEWLTEVH YLGRLHHMNL VKLIGYCLEG EKRLLVYEYM PKGSLENHLF RRGAEPIPWK TRMKVAFSAA
201: RGLSFLHEAK VIYRDFKASN ILLDVDFNAK LSDFGLAKAG PTGDRTHVTT QVIGTQGYAA PEYIATGRLT SKSDVYSFGV VLLELLSGRP TLDKSKVGVE
301: RNLVDWAIPY LVDRRKVFRI MDTKLGGQYP HKGACAAANI ALRCLNTEPK LRPDMADVLS TLQQLETSSK KMGSTQNIVM SPSSHMS

Arabidopsis Description

PBL18Probable serine/threonine-protein kinase PBL18 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF79]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.