Factsheet for GSMUA_Achr5P02480_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P15720_001
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P23000_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P02480_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P26030_001
GSMUA_Achr5P26360_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr7P01120_001
GSMUA_Achr7P27110_001
GSMUA_Achr8P01460_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001
GSMUA_Achr9P30020_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34650.1	GSMUA_Achr5P02480_001	AT2G34650.1	12857841
AT2G34650.1	GSMUA_Achr7P01120_001	AT2G34650.1	12857841
AT2G34650.1	GSMUA_Achr10P...	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr10P...	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr10P...	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr10P...	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr11P...	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr2P01120_001	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr3P09330_001	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr3P25040_001	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr5P07820_001	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr5P27590_001	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr6P15990_001	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr6P23670_001	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr8P05790_001	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr9P17280_001	AT2G41100.1	12857841
AT2G34650.1	GSMUA_Achr10P...	AT5G04510.1	16601102
AT2G34650.1	GSMUA_Achr5P26030_001	AT5G04510.1	16601102
AT2G34650.1	GSMUA_Achr3P23000_001	AT5G54490.1	12857841
AT2G34650.1	GSMUA_Achr5P26360_001	AT5G54490.1	12857841
AT2G34650.1	GSMUA_Achr7P27110_001	AT5G54490.1	12857841
AT2G34650.1	GSMUA_Achr8P01460_001	AT5G54490.1	12857841
AT2G34650.1	GSMUA_Achr9P30020_001	AT5G54490.1	12857841
AT2G34650.1	GSMUA_Achr1P15720_001	AT5G57090.1	17889649

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P01120_001	Banana	nucleus	59.01	65.01
TraesCS5B01G377300.1	Wheat	plastid	50.21	54.55
Os03t0642300-00	Rice	plastid	53.22	53.8
TraesCS5B01G037900.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	54.08	52.72
TraesCS5D01G044800.1	Wheat	plasma membrane	53.86	52.51
TraesCS5A01G037100.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	53.65	52.41
TraesCS5A01G375200.1	Wheat	plastid	51.5	52.4
HORVU5Hr1G009390.1	Barley	cytosol, nucleus, plasma membrane	54.29	52.38
Zm00001d033234_P001	Maize	plastid	52.58	52.02
EER93759	Sorghum	plastid	53.0	51.67
Os12t0614600-01	Rice	cytosol	53.65	51.65
AT2G34650.1	Thale cress	cytosol	47.21	50.23
Bra005403.1-P	Field mustard	cytosol	47.21	50.11
CDY17273	Canola	cytosol	47.21	50.11
Bra021925.1-P	Field mustard	cytosol	47.21	50.11
Zm00001d031068_P001	Maize	plastid	52.58	49.9
CDY43662	Canola	cytosol	47.0	49.89
CDX84294	Canola	cytosol, plastid	47.0	49.89
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	33.26	49.21
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	47.42	49.0
OQU79615	Sorghum	cytosol, plastid	53.0	48.91
GSMUA_Achr10P...	Banana	nucleus	41.85	47.45
KRH21098	Soybean	cytosol, plastid	45.49	46.9
KRH59216	Soybean	cytosol	46.14	46.74
GSMUA_Achr5P00910_001	Banana	extracellular	28.33	46.64
GSMUA_Achr10P...	Banana	cytosol, plastid	31.97	46.42
GSMUA_Achr3P16430_001	Banana	cytosol	34.12	45.82
GSMUA_Achr6P17280_001	Banana	cytosol, plastid	28.76	45.58
GSMUA_Achr7P09970_001	Banana	nucleus	41.2	45.39
HORVU5Hr1G093040.2	Barley	plastid	51.29	45.35
GSMUA_Achr5P22450_001	Banana	cytosol	33.48	44.83
GSMUA_Achr4P18040_001	Banana	cytosol	37.98	39.25
GSMUA_Achr4P21830_001	Banana	cytosol	37.34	39.19
GSMUA_Achr1P09470_001	Banana	cytosol	37.12	36.89
GSMUA_Achr2P19230_001	Banana	cytosol	36.48	36.17
GSMUA_Achr4P13100_001	Banana	cytosol	35.19	35.19
GSMUA_Achr4P06290_001	Banana	cytosol	34.76	34.91
GSMUA_AchrUn_...	Banana	cytosol	39.06	34.8
GSMUA_Achr1P00540_001	Banana	cytosol	38.84	34.54
GSMUA_AchrUn_...	Banana	cytosol	36.48	34.34
GSMUA_Achr5P12590_001	Banana	cytosol	38.84	34.15
GSMUA_Achr7P06890_001	Banana	cytosol	39.27	33.89
GSMUA_Achr7P20130_001	Banana	nucleus	37.77	33.65
GSMUA_Achr8P25360_001	Banana	cytosol	37.12	33.02
GSMUA_Achr5P04290_001	Banana	cytosol	34.76	32.53
GSMUA_Achr10P...	Banana	cytosol	38.63	26.01
GSMUA_Achr5P06950_001	Banana	cytosol, mitochondrion	37.77	25.77
GSMUA_Achr11P...	Banana	cytosol	37.34	24.27
GSMUA_Achr6P13320_001	Banana	cytosol	36.91	23.69
GSMUA_Achr8P16090_001	Banana	nucleus	37.34	23.05

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr5G02480_001	EnsemblPlants:GSMUA_Achr5P02480_001	EnsemblPlants:GSMUA_Achr5T02480_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SV27
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF60
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294D108
SEG:seg	:	:	:	:	:

Description

AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G02480_001]

Coordinates

chr5:-:1586911..1588943

Molecular Weight (calculated)

51534.0 Da

IEP (calculated)

9.019

GRAVY (calculated)

-0.154

Length

466 amino acids

Sequence
(BLAST)

001: MCIYIDRAAV LSVSFGECER AITGTSETER FRAPLIPSFA SRLDSRKSLD FSCSSFYLLL LDPKRLGLRD FGAKMLGSPL DSDGEIVQEA LNSMSSGGVS
101: CDERRSSFSR VSYDAASMAA LELSFGDLNC GTFASKPHRS LDPAWAAIRS RTSAGGARPS NLGHRDFELV RRIGRGNMGT VYLCRLRGEA SQCMYAMKVM
201: DKLALAKKKK KLESAVTERR ILRVLDHPFL PTLYAAFDMP PRYSCLVMEY CSGGDLHTLR LRQPHLRFSV SATRFYAAEV LLALEYLHML GIVYRDLKPE
301: NILIRADGHI MLTDFDLSLP DRRFVAEPVV ARSSSFVGTH EYVAPEVAGG GPHGSAVDWW AYGVLLYELL YGRTPFAGET LKATLRNIVT EPLVFPPPSS
401: PSSRSSDSAA RDLIAHLLDK DPEARLGSRR GAADVKEHAF FRGLNFALMR SHRPPTVPVR HGPNST

Best Arabidopsis Sequence Match ( AT2G34650.1 )
(BLAST)

001: MLRESDGEMS LGTTNSPISS GTESCSSFSR LSFDAPPSTI PEEESFLSLK PHRSSDFAYA EIRRRKKQGL TFRDFRLMRR IGAGDIGTVY LCRLAGDEEE
101: SRSSYFAMKV VDKEALALKK KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS SARFYAAEVL VALEYLHMLG
201: IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP
301: EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA
401: LIRTLTPPEI PSSVVKKPMK SATFSGRSSN KPAAFDYF

Arabidopsis Description

PIDPID [Source:UniProtKB/TrEMBL;Acc:A0A178VTE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.