Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005170 | Potato | cytosol | 37.82 | 13.04 |
| CDX69339 | Canola | cytosol | 48.74 | 9.03 |
| AT4G37870.1 | Thale cress | cytosol | 50.42 | 8.94 |
| GSMUA_Achr8P18810_001 | Banana | cytosol | 50.42 | 8.84 |
| CDX75681 | Canola | cytosol | 49.58 | 8.82 |
| CDX72658 | Canola | cytosol | 47.06 | 8.78 |
| Bra011792.1-P | Field mustard | cytosol | 48.74 | 8.67 |
| KRH39528 | Soybean | nucleus | 47.9 | 8.62 |
| KRH74430 | Soybean | endoplasmic reticulum | 47.06 | 8.48 |
| KXG39751 | Sorghum | cytosol | 46.22 | 8.35 |
| PGSC0003DMT400016354 | Potato | cytosol | 46.22 | 8.31 |
| Solyc04g076880.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 45.38 | 8.16 |
| Bra017856.1-P | Field mustard | cytosol | 45.38 | 8.12 |
| TraesCS4D01G220500.1 | Wheat | cytosol | 43.7 | 7.78 |
| TraesCS4B01G220200.1 | Wheat | cytosol | 43.7 | 7.76 |
| KRH62155 | Soybean | cytosol, nucleus | 42.02 | 7.44 |
| TraesCS4A01G083900.1 | Wheat | mitochondrion | 44.54 | 7.34 |
| PGSC0003DMT400041521 | Potato | cytosol | 39.5 | 7.18 |
| PGSC0003DMT400005163 | Potato | cytosol | 38.66 | 7.02 |
| Solyc12g088160.1.1 | Tomato | cytosol, plastid | 37.82 | 6.91 |
| KRH45461 | Soybean | nucleus | 35.29 | 6.67 |
| KRH75627 | Soybean | cytosol | 36.13 | 6.64 |
| GSMUA_Achr4P22070_001 | Banana | cytosol | 35.29 | 6.55 |
| HORVU4Hr1G062440.2 | Barley | cytosol | 16.81 | 2.97 |
| CDY31619 | Canola | cytosol | 10.08 | 2.24 |
| Zm00001d008318_P001 | Maize | cytosol | 2.52 | 1.34 |
| GSMUA_Achr4P20840_001 | Banana | endoplasmic reticulum | 5.88 | 1.19 |
| KRH52864 | Soybean | cytosol | 1.68 | 0.55 |
| Os10t0204300-01 | Rice | cytosol | 0.0 | 0.0 |
| KRH37948 | Soybean | cytosol | 0.0 | 0.0 |
| VIT_07s0205g00070.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P20850_001 | EnsemblPlants:GSMUA_Achr4T20850_001 | EnsemblPlantsGene:GSMUA_Achr4G20850_001 | UniParc:UPI00029631C9 | UniProt:M0SQP8 | MapMan:35.1 |
Description
Putative Phosphoenolpyruvate carboxykinase [ATP] [Source:GMGC_GENE;Acc:GSMUA_Achr4G20850_001]
Coordinates
chr4:-:21394130..21395669
Molecular Weight (calculated)
12959.3 Da
IEP (calculated)
6.672
GRAVY (calculated)
-0.583
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENGDFRFG NSVKAVVMPN GLPKIHTHGG GAGAENGICH DDSAPPVKAQ TIDELHSLQK KRSAPTTPIK DGLQQQQQDN AAFATISEEE RHKLQLQSIS
101: WILSIKTKLA NCDPNYLLE
101: WILSIKTKLA NCDPNYLLE
001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F
Arabidopsis Description
PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.