Factsheet for Bra011792.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra011792.1-P
Bra017856.1-P
Bra018296.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37870.1	Bra000214.1-P	AT2G41090.1	17360592
AT4G37870.1	Bra018296.1-P	AT3G51920.1	17360592
AT4G37870.1	Bra033467.1-P	AT3G51920.1	17360592
AT4G37870.1	Bra011792.1-P	AT4G37870.1	21798944
AT4G37870.1	Bra017856.1-P	AT4G37870.1	21798944
AT4G37870.1	Bra002368.1-P	AT5G21274.1	17360592
AT4G37870.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75681	Canola	cytosol	99.4	99.4
CDX69339	Canola	cytosol	95.07	99.07
Bra017856.1-P	Field mustard	cytosol	95.22	95.79
AT4G37870.1	Thale cress	cytosol	95.22	94.93
VIT_00s1995g00010.t01	Wine grape	cytosol	58.45	87.67
KRH52864	Soybean	cytosol	47.38	86.61
KRH74430	Soybean	endoplasmic reticulum	81.61	82.73
KRH39528	Soybean	nucleus	81.61	82.6
KXG39751	Sorghum	cytosol	80.72	81.94
KRH45461	Soybean	nucleus	76.23	80.95
KRH75627	Soybean	cytosol	78.33	80.86
TraesCS4D01G220500.1	Wheat	cytosol	79.82	79.94
TraesCS4B01G220200.1	Wheat	cytosol	79.52	79.4
Solyc04g076880.2.1	Tomato	cytosol, extracellular, nucleus, plastid	78.03	78.85
Bra024410.1-P	Field mustard	cytosol	78.48	78.83
PGSC0003DMT400016354	Potato	cytosol	77.88	78.7
Bra031848.1-P	Field mustard	cytosol	78.33	78.56
KRH62155	Soybean	cytosol, nucleus	78.48	78.12
Solyc12g088160.1.1	Tomato	cytosol, plastid	74.29	76.34
PGSC0003DMT400041521	Potato	cytosol	74.29	75.88
PGSC0003DMT400005163	Potato	cytosol	74.14	75.73
TraesCS4A01G083900.1	Wheat	mitochondrion	79.97	74.1
HORVU4Hr1G062440.2	Barley	cytosol	71.9	71.47
VIT_00s2576g00010.t01	Wine grape	cytosol	23.92	68.67
KRH37948	Soybean	cytosol	12.71	66.93
PGSC0003DMT400005170	Potato	cytosol	34.23	66.38
Zm00001d008318_P001	Maize	cytosol	17.04	50.89
GSMUA_Achr4P20850_001	Banana	cytosol	8.67	48.74
VIT_00s2840g00010.t01	Wine grape	cytosol	6.43	48.31
Os10t0204300-01	Rice	cytosol	3.44	47.92

Protein Annotations

KEGG:00010+4.1.1.49	KEGG:00020+4.1.1.49	KEGG:00620+4.1.1.49	KEGG:00710+4.1.1.49	Gene3D:2.170.8.10	MapMan:3.10.1
Gene3D:3.40.449.10	Gene3D:3.90.228.20	EnsemblPlantsGene:Bra011792	EnsemblPlants:Bra011792.1	EnsemblPlants:Bra011792.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004611	GO:GO:0004612	GO:GO:0005488	GO:GO:0005524
GO:GO:0005975	GO:GO:0006094	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0017076
InterPro:IPR008210	InterPro:IPR013035	UniProt:M4D5N5	HAMAP:MF_00453	InterPro:PEPCK_ATP_CS	InterPro:PEP_carboxykinase_ATP
InterPro:PEP_carboxykinase_C	InterPro:PEP_carboxykinase_N	PFAM:PF01293	ScanProsite:PS00532	PANTHER:PTHR30031	PANTHER:PTHR30031:SF4
SUPFAM:SSF53795	SUPFAM:SSF68923	TIGRFAMs:TIGR00224	UniParc:UPI0002546415	SEG:seg	:

Description

AT4G37870 (E=0.0) PCK1, PEPCK | PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1); ATP binding / phosphoenolpyruvate carboxykinase (ATP)/ phosphoenolpyruvate carboxykinase/ purine nucleotide binding

Coordinates

chrA01:+:485035..488151

Molecular Weight (calculated)

73333.1 Da

IEP (calculated)

7.331

GRAVY (calculated)

-0.330

Length

669 amino acids

Sequence
(BLAST)

001: MSAGNGNANG DGGFSFPKGP AMRKITTGAK RGSEICHDDS GPTVKATTID ELHSLQKKRS APTTPINQSG AAAFAAVSEE ERQKIQLQSI SASLASLTRE
101: SGPKVVRGDP AEKKADGSTT PAYAHGQHHS IFSPDLGAVS DSSLKFTHVL YNLSPAELYE QAIKYEKGSF ITSNGALATL SGAKTGRAPR DKRVVRDATT
201: EGELWWGKGS PNIEMDEHTF MVNRERAVDY LNSLEKVFVN DQFLNWDPEN RIKVRIVSAR AYHSLFMHNM CIRPTPEELE SFGTPDFTIY NAGQFPCNRY
301: THYMTSSTSV DLNLSRREMV ILGTQYAGEM KKGLFSVMHY LMPKRRILSL HSGCNMGKEG DVALFFGLSG TGKTTLSTDH NRYLIGDDEH CWTETGVSNI
401: EGGCYAKCVD LSREKEPDIW NAIKFGTVLE NVVFDEHTRE VDYSDKSVTE NTRAAYPIEF IPNAKIPCVG PHPKNVILLA CDAFGVLPPV SKLNLAQTMY
501: HFISGYTALV AGTEDGIKEP TATFSACFGA AFIMLHPTKY AAMLAEKMKT QGATGWLVNT GWAGGSYGVG NRIKVAYTRK IIDAIHSGSL LKANYKKTEI
601: FGFEIPTEIE GIPSEILDPI NSWSDKKAHK ETLLKLGGLF KKNFETFANH KIGVDGKLTE EILAAGPIF

Best Arabidopsis Sequence Match ( AT4G37870.1 )
(BLAST)

001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F

Arabidopsis Description

PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.