Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G220200.1 | Wheat | cytosol | 98.2 | 97.91 |
| KXG39751 | Sorghum | cytosol | 90.27 | 91.5 |
| TraesCS4A01G083900.1 | Wheat | mitochondrion | 98.2 | 90.86 |
| Zm00001d047893_P003 | Maize | cytosol | 89.22 | 90.44 |
| Os03t0255500-01 | Rice | cytosol, nucleus, plasma membrane | 89.37 | 90.05 |
| VIT_00s1995g00010.t01 | Wine grape | cytosol | 58.23 | 87.22 |
| Zm00001d028471_P005 | Maize | cytosol | 86.53 | 86.14 |
| GSMUA_Achr4P20840_001 | Banana | endoplasmic reticulum | 76.05 | 86.1 |
| KRH52864 | Soybean | cytosol | 47.16 | 86.07 |
| CDY31619 | Canola | cytosol | 67.22 | 83.77 |
| HORVU4Hr1G062440.2 | Barley | cytosol | 83.53 | 82.91 |
| GSMUA_Achr4P22070_001 | Banana | cytosol | 79.49 | 82.84 |
| KRH74430 | Soybean | endoplasmic reticulum | 80.84 | 81.82 |
| KRH39528 | Soybean | nucleus | 80.39 | 81.24 |
| CDX69339 | Canola | cytosol | 76.95 | 80.06 |
| GSMUA_Achr8P18810_001 | Banana | cytosol | 81.29 | 79.97 |
| CDX75681 | Canola | cytosol | 80.09 | 79.97 |
| Bra011792.1-P | Field mustard | cytosol | 79.94 | 79.82 |
| KRH75627 | Soybean | cytosol | 77.1 | 79.48 |
| CDX72658 | Canola | cytosol | 75.9 | 79.47 |
| KRH45461 | Soybean | nucleus | 74.85 | 79.37 |
| CDY08763 | Canola | extracellular | 32.19 | 79.34 |
| AT4G37870.1 | Thale cress | cytosol | 79.64 | 79.28 |
| Bra017856.1-P | Field mustard | cytosol | 78.89 | 79.25 |
| CDY52537 | Canola | cytosol | 78.74 | 78.74 |
| Solyc04g076880.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 77.84 | 78.55 |
| PGSC0003DMT400016354 | Potato | cytosol | 77.84 | 78.55 |
| Bra031848.1-P | Field mustard | cytosol | 78.29 | 78.41 |
| CDY37839 | Canola | cytosol | 78.29 | 78.41 |
| Bra024410.1-P | Field mustard | cytosol | 78.14 | 78.38 |
| CDY45615 | Canola | cytosol | 77.99 | 78.23 |
| CDY08764 | Canola | cytosol | 77.99 | 78.23 |
| KRH62155 | Soybean | cytosol, nucleus | 78.44 | 77.98 |
| Solyc12g088160.1.1 | Tomato | cytosol, plastid | 75.45 | 77.42 |
| PGSC0003DMT400041521 | Potato | cytosol | 75.75 | 77.25 |
| PGSC0003DMT400005163 | Potato | cytosol | 75.45 | 76.95 |
| VIT_07s0205g00070.t01 | Wine grape | cytosol | 6.14 | 74.55 |
| AT5G65690.2 | Thale cress | cytosol | 76.8 | 73.18 |
| KRH37948 | Soybean | cytosol | 13.32 | 70.08 |
| PGSC0003DMT400005170 | Potato | cytosol | 34.73 | 67.25 |
| VIT_00s2576g00010.t01 | Wine grape | cytosol | 22.9 | 65.67 |
| GSMUA_Achr4P20850_001 | Banana | cytosol | 7.78 | 43.7 |
| VIT_00s2840g00010.t01 | Wine grape | cytosol | 5.69 | 42.7 |
Protein Annotations
| KEGG:00010+4.1.1.49 | KEGG:00020+4.1.1.49 | KEGG:00620+4.1.1.49 | KEGG:00710+4.1.1.49 | Gene3D:2.170.8.10 | MapMan:3.10.1 |
| Gene3D:3.40.449.10 | Gene3D:3.90.228.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004611 |
| GO:GO:0004612 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005975 | GO:GO:0006094 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0017076 | InterPro:IPR008210 | InterPro:IPR013035 | HAMAP:MF_00453 |
| InterPro:PEPCK_ATP_CS | InterPro:PEP_carboxykinase_ATP | InterPro:PEP_carboxykinase_C | InterPro:PEP_carboxykinase_N | PFAM:PF01293 | ScanProsite:PS00532 |
| PANTHER:PTHR30031 | PANTHER:PTHR30031:SF4 | SUPFAM:SSF53795 | SUPFAM:SSF68923 | TIGRFAMs:TIGR00224 | EnsemblPlantsGene:TraesCS4D01G220500 |
| EnsemblPlants:TraesCS4D01G220500.1 | TIGR:cd00484 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4D:+:375732783..375738854
Molecular Weight (calculated)
73625.5 Da
IEP (calculated)
7.164
GRAVY (calculated)
-0.366
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPNGLARI DTTHAEKKAA AKHENGICHD DSSAPVRAQN IDELHSMQRK RSAPTTPIKD TSASPFAVAV SDEDRRKQQL QSISASLASL TRETGPKVVR
101: GDPARKGEAA AKTAPAAAPP PPQPHHHHHH HVAPTISVSD SSLKFTHVLY NLSPGELYEQ AIKYEKGSFI TATGALATLS GAKTGRSPRD KRIVKDEAAA
201: QELWWGKGSP NIEMDEHTFL TNRERAVDYL NSLDKVYVND QFLNWDPENR IKVRIISARA YHSLFMHNMC IRPTEEELES FGTPDFTIYN AGKFPCNRYT
301: HYMTSSTSVD INLGRREMVI LGTQYAGEMK KGLFGVMHYL MPKRRILSLH SGCNMGRDGD VALFFGLSGT GKTTLSTDHN RLLIGDDEHC WSDNGVSNIE
401: GGCYAKCIDL SREKEPDIWN AIKFGTVLEN VVFDEHTREV DYTDKSVTEN TRAAYPIEYI PNAKIPCVGP HPKNVILLAC DAFGVLPPVS KLNLAQTMYH
501: FISGYTALVA GTEDGIKEPQ ATFSACFGAA FIMLHPTKYA AMLAEKMQTY GATGWLVNTG WSGGRYGVGK RIKLPYTRKI IDAIHSGELL TANYQKTEVF
601: GLEIPTAIEG VPSEILDPIN TWTDKAAYKE TLLKLAGLFG KNFEVFASYK IGEDSTLTEE ILAAGPKV
101: GDPARKGEAA AKTAPAAAPP PPQPHHHHHH HVAPTISVSD SSLKFTHVLY NLSPGELYEQ AIKYEKGSFI TATGALATLS GAKTGRSPRD KRIVKDEAAA
201: QELWWGKGSP NIEMDEHTFL TNRERAVDYL NSLDKVYVND QFLNWDPENR IKVRIISARA YHSLFMHNMC IRPTEEELES FGTPDFTIYN AGKFPCNRYT
301: HYMTSSTSVD INLGRREMVI LGTQYAGEMK KGLFGVMHYL MPKRRILSLH SGCNMGRDGD VALFFGLSGT GKTTLSTDHN RLLIGDDEHC WSDNGVSNIE
401: GGCYAKCIDL SREKEPDIWN AIKFGTVLEN VVFDEHTREV DYTDKSVTEN TRAAYPIEYI PNAKIPCVGP HPKNVILLAC DAFGVLPPVS KLNLAQTMYH
501: FISGYTALVA GTEDGIKEPQ ATFSACFGAA FIMLHPTKYA AMLAEKMQTY GATGWLVNTG WSGGRYGVGK RIKLPYTRKI IDAIHSGELL TANYQKTEVF
601: GLEIPTAIEG VPSEILDPIN TWTDKAAYKE TLLKLAGLFG KNFEVFASYK IGEDSTLTEE ILAAGPKV
001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F
Arabidopsis Description
PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.