CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX69339
CDX72658
CDX73678
CDX75681
CDX92401
CDX95314
CDY23174
CDY31619

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37870.1	CDX73678	AT3G51920.1	17360592
AT4G37870.1	CDX95314	AT3G51920.1	17360592
AT4G37870.1	CDY23174	AT3G51920.1	17360592
AT4G37870.1	CDX69339	AT4G37870.1	21798944
AT4G37870.1	CDX72658	AT4G37870.1	21798944
AT4G37870.1	CDX75681	AT4G37870.1	21798944
AT4G37870.1	CDY31619	AT4G37870.1	21798944
AT4G37870.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1995g00010.t01	Wine grape	cytosol	67.91	81.61
CDY08763	Canola	extracellular	40.67	80.44
KRH52864	Soybean	cytosol	54.48	79.78
Bra017856.1-P	Field mustard	cytosol	96.08	77.44
CDX72658	Canola	cytosol	91.6	76.96
CDX75681	Canola	cytosol	95.34	76.38
AT4G37870.1	Thale cress	cytosol	94.59	75.56
CDX69339	Canola	cytosol	90.3	75.39
KRH74430	Soybean	endoplasmic reticulum	86.01	69.85
KRH39528	Soybean	nucleus	85.63	69.44
KXG39751	Sorghum	cytosol	84.89	69.04
KRH75627	Soybean	cytosol	83.21	68.83
KRH45461	Soybean	nucleus	80.6	68.57
CDY37839	Canola	cytosol	84.51	67.92
CDY52537	Canola	cytosol	84.51	67.81
CDY45615	Canola	cytosol	83.96	67.57
CDY08764	Canola	cytosol	83.96	67.57
TraesCS4D01G220500.1	Wheat	cytosol	83.77	67.22
KRH37948	Soybean	cytosol	15.86	66.93
TraesCS4B01G220200.1	Wheat	cytosol	83.4	66.72
KRH62155	Soybean	cytosol, nucleus	83.4	66.52
Solyc04g076880.2.1	Tomato	cytosol, extracellular, nucleus, plastid	80.6	65.26
Solyc12g088160.1.1	Tomato	cytosol, plastid	79.1	65.13
PGSC0003DMT400016354	Potato	cytosol	80.04	64.8
PGSC0003DMT400041521	Potato	cytosol	78.92	64.58
PGSC0003DMT400005163	Potato	cytosol	78.73	64.43
HORVU4Hr1G062440.2	Barley	cytosol	78.92	62.85
TraesCS4A01G083900.1	Wheat	mitochondrion	83.77	62.19
PGSC0003DMT400005170	Potato	cytosol	33.4	51.88
Zm00001d008318_P001	Maize	cytosol	20.34	48.66
Os10t0204300-01	Rice	cytosol	4.1	45.83
VIT_00s2576g00010.t01	Wine grape	cytosol	18.28	42.06
VIT_00s2840g00010.t01	Wine grape	cytosol	2.8	16.85
GSMUA_Achr4P20850_001	Banana	cytosol	2.24	10.08

Protein Annotations

KEGG:00010+4.1.1.49	KEGG:00020+4.1.1.49	KEGG:00620+4.1.1.49	KEGG:00710+4.1.1.49	MapMan:3.10.1	Gene3D:3.40.449.10
Gene3D:3.90.228.20	GO:A0A078H2I3	UniProt:A0A078H2I3	EnsemblPlants:CDY31619	ProteinID:CDY31619	ProteinID:CDY31619.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004611	GO:GO:0004612	GO:GO:0005488
GO:GO:0005524	GO:GO:0005975	GO:GO:0006094	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0017076	EnsemblPlantsGene:GSBRNA2T00050162001	InterPro:IPR008210	InterPro:IPR013035	HAMAP:MF_00453	InterPro:PEP_carboxykinase_ATP
InterPro:PEP_carboxykinase_C	InterPro:PEP_carboxykinase_N	PFAM:PF01293	PIRSF:PIRSF006294	PANTHER:PTHR30031	PANTHER:PTHR30031:SF4
MetaCyc:PWY-561	MetaCyc:PWY-7117	SUPFAM:SSF53795	SUPFAM:SSF68923	UniPathway:UPA00138	UniParc:UPI0004EDF0F9
SEG:seg	:	:	:	:	:

Description

BnaA03g54330DBnaA03g54330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2I3]

Coordinates

chrLK032275:+:442824..445869

Molecular Weight (calculated)

59433.9 Da

IEP (calculated)

6.897

GRAVY (calculated)

-0.274

Length

536 amino acids

Sequence
(BLAST)

001: MKIMGDTKKA DGSTTPAYAH GQHQSIFSPA LGAVSDSSLK FTHVLYNLSP AELYEQAIKY EKGSFITSNG ALATLSGAKT GRAPRDKRVV RDSTTEDELW
101: WGKGSPNIEM DEHTFMVNRE RAVDYLNSLE KVFVNDQFLN WDPENRIKVR IVSARAYHSL FMHNMCIRPT PEELESFGTP DFTICNAGQF PCNRYTHYMT
201: SSTSVDLNLS RREMVILGTQ YAGEMKKGLF SVMHYLMPKR RILSLHSGCN MGKDGDVALF FGLSGTGKTT LSTDHNRYLI GDDEHCWTET GFGTVLENVV
301: FDEHTREVDY SDKSVTENTR AAYPIEFIPN AKIPCVGPHP KNVILLACDA FGVLPPVSKL NLAQTMYHFI SGYTALVAGT EDGIKEPTAT FSACFGAAFI
401: MLHPTKYAAM LAEKMKRQGA TGWLVNTGWS GGSYGVGNRI KLAYTRKIID AIHSGSLLEA NYKKTDIFGF EIPTEIEGIP SEILDPVNSW SDKNAHKETL
501: LKLGGLFKKN FETFANHKIG VDGKLTEEIL SAGPIF

Best Arabidopsis Sequence Match ( AT4G37870.1 )
(BLAST)

001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F

Arabidopsis Description

PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.