Factsheet for TraesCS4A01G083900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4A01G083900.1
TraesCS4B01G131100.1
TraesCS4B01G220200.1
TraesCS4D01G126100.1
TraesCS4D01G220500.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37870.1	TraesCS1A01G308700.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS1A01G308800.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS1B01G319300.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS1D01G308000.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS2B01G113800.2	AT2G41090.1	17360592
AT4G37870.1	TraesCS3A01G184500.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS3A01G191900.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS3A01G335000.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS3B01G219900.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS3B01G365900.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS3D01G188600.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS3D01G194500.2	AT2G41090.1	17360592
AT4G37870.1	TraesCS3D01G328300.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS4B01G131100.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS4D01G126100.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS5A01G057100.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS5A01G057200.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS5A01G139700.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS5B01G059900.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS5B01G137100.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS5D01G068000.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS5D01G068100.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS5D01G153400.1	AT2G41090.1	17360592
AT4G37870.1	TraesCS4A01G083900.1	AT4G37870.1	21798944
AT4G37870.1	TraesCS4B01G220200.1	AT4G37870.1	21798944
AT4G37870.1	TraesCS4D01G220500.1	AT4G37870.1	21798944
AT4G37870.1	TraesCS1A01G308700.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS1A01G308800.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS1B01G319300.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS1D01G308000.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS2B01G113800.2	AT5G21274.1	17360592
AT4G37870.1	TraesCS3A01G184500.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS3A01G191900.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS3A01G335000.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS3B01G219900.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS3B01G365900.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS3D01G188600.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS3D01G194500.2	AT5G21274.1	17360592
AT4G37870.1	TraesCS3D01G328300.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS4B01G131100.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS4D01G126100.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS5A01G057100.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS5A01G057200.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS5A01G139700.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS5B01G059900.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS5B01G137100.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS5D01G068000.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS5D01G068100.1	AT5G21274.1	17360592
AT4G37870.1	TraesCS5D01G153400.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G220500.1	Wheat	cytosol	90.86	98.2
TraesCS4B01G220200.1	Wheat	cytosol	90.17	97.16
KXG39751	Sorghum	cytosol	83.52	91.5
Zm00001d047893_P003	Maize	cytosol	82.55	90.44
Os03t0255500-01	Rice	cytosol, nucleus, plasma membrane	82.69	90.05
VIT_00s1995g00010.t01	Wine grape	cytosol	53.88	87.22
GSMUA_Achr4P20840_001	Banana	endoplasmic reticulum	70.36	86.1
KRH52864	Soybean	cytosol	43.63	86.07
Zm00001d028471_P005	Maize	cytosol	79.92	85.99
CDY31619	Canola	cytosol	62.19	83.77
GSMUA_Achr4P22070_001	Banana	cytosol	74.1	83.46
HORVU4Hr1G062440.2	Barley	cytosol	77.56	83.21
KRH74430	Soybean	endoplasmic reticulum	75.07	82.12
KRH39528	Soybean	nucleus	74.65	81.54
GSMUA_Achr8P18810_001	Banana	cytosol	75.48	80.27
CDX69339	Canola	cytosol	71.33	80.22
CDX75681	Canola	cytosol	74.24	80.12
Bra011792.1-P	Field mustard	cytosol	74.1	79.97
AT4G37870.1	Thale cress	cytosol	74.24	79.88
CDX72658	Canola	cytosol	70.5	79.78
KRH75627	Soybean	cytosol	71.47	79.63
Bra017856.1-P	Field mustard	cytosol	73.27	79.55
KRH45461	Soybean	nucleus	69.39	79.52
CDY52537	Canola	cytosol	73.41	79.34
CDY08763	Canola	extracellular	29.78	79.34
CDY37839	Canola	cytosol	72.99	79.01
Bra031848.1-P	Field mustard	cytosol	72.99	79.01
Bra024410.1-P	Field mustard	cytosol	72.85	78.98
CDY45615	Canola	cytosol	72.71	78.83
CDY08764	Canola	cytosol	72.71	78.83
PGSC0003DMT400016354	Potato	cytosol	72.02	78.55
Solyc04g076880.2.1	Tomato	cytosol, extracellular, nucleus, plastid	72.02	78.55
KRH62155	Soybean	cytosol, nucleus	72.85	78.27
Solyc12g088160.1.1	Tomato	cytosol, plastid	69.81	77.42
PGSC0003DMT400041521	Potato	cytosol	70.08	77.25
PGSC0003DMT400005163	Potato	cytosol	69.81	76.95
VIT_07s0205g00070.t01	Wine grape	cytosol	5.68	74.55
AT5G65690.2	Thale cress	cytosol	71.47	73.61
KRH37948	Soybean	cytosol	12.33	70.08
PGSC0003DMT400005170	Potato	cytosol	32.27	67.54
VIT_00s2576g00010.t01	Wine grape	cytosol	21.47	66.52
GSMUA_Achr4P20850_001	Banana	cytosol	7.34	44.54
VIT_00s2840g00010.t01	Wine grape	cytosol	5.4	43.82

Protein Annotations

KEGG:00010+4.1.1.49	KEGG:00020+4.1.1.49	KEGG:00620+4.1.1.49	KEGG:00710+4.1.1.49	Gene3D:2.170.8.10	MapMan:3.10.1
Gene3D:3.40.449.10	Gene3D:3.90.228.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004611
GO:GO:0004612	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0006094	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0017076	InterPro:IPR008210	InterPro:IPR013035	HAMAP:MF_00453
InterPro:PEPCK_ATP_CS	InterPro:PEP_carboxykinase_ATP	InterPro:PEP_carboxykinase_C	InterPro:PEP_carboxykinase_N	PFAM:PF01293	ScanProsite:PS00532
PANTHER:PTHR30031	PANTHER:PTHR30031:SF4	SUPFAM:SSF53795	SUPFAM:SSF68923	TIGRFAMs:TIGR00224	EnsemblPlantsGene:TraesCS4A01G083900
EnsemblPlants:TraesCS4A01G083900.1	TIGR:cd00484	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:88428285..88432958

Molecular Weight (calculated)

79048.0 Da

IEP (calculated)

7.681

GRAVY (calculated)

-0.350

Length

722 amino acids

Sequence
(BLAST)

001: MVSSGPFKSL PRRGSTHLSL APCAVVCHRH HPPTASRTPV LSSPQEGGAA MAAPNGLARI DTTHPEKKAA AAAAKHENGI CHDDSSAPVR AQNIDELHSM
101: QRKRSAPTTP IKDTGASPFA VAVSDEDRRK QQLQSISASL ASLTRETGPK VVRGDPARKG EAAAKTSAPA AAPPPPQPHH HHHHHVAPTI SVSDSSLKFT
201: HVLYNLSPGE LYEQAIKYEK GSFITATGAL ATLSGAKTGR SPRDKRIVKD EAAAQELWWG KGSPNIEMDE HTFLTNRERA VDYLNSLDKV YVNDQFLNWD
301: PENRIKVRII SARAYHSLFM HNMCIRPTEE ELESFGTPDF TIYNAGKFPC NRYTHYMTSS TSVDINLGRR EMVILGTQYA GEMKKGLFGV MHYLMPKRRI
401: LSLHSGCNMG RDGDVALFFG LSGTGKTTLS TDHNRLLIGD DEHCWSDNGV SNIEGGCYAK CIDLSREKEP DIWNAIKFGT VLENVVFDEH TREVDYTDKS
501: VTENTRAAYP IEYIPNAKIP CVGPHPKNVI LLACDAFGVL PPVSKLNLAQ TMYHFISGYT ALVAGTEDGI KEPQATFSAC FGAAFIMLHP TKYAAMLAEK
601: MQTYGATGWL VNTGWSGGRY GVGKRIKLPY TRKIIDAIHS GELLTANYQK TEVFGLEIPT AIEGVPSEIL DPINTWTDKA AYKETLLKLA GLFGKNFEVF
701: ASYKIGEDST LTEEILAAGP KV

Best Arabidopsis Sequence Match ( AT4G37870.1 )
(BLAST)

001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F

Arabidopsis Description

PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.