Factsheet for Os03t0255500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39751	Sorghum	cytosol	93.06	93.63
Zm00001d047893_P003	Maize	cytosol	91.86	92.41
TraesCS4D01G220500.1	Wheat	cytosol	90.05	89.37
TraesCS4B01G220200.1	Wheat	cytosol	89.59	88.66
Zm00001d028471_P005	Maize	cytosol	88.84	87.78
TraesCS4A01G083900.1	Wheat	mitochondrion	90.05	82.69
Os10t0204400-01	Rice	cytosol	77.83	81.0
HORVU4Hr1G062440.2	Barley	cytosol	79.34	78.16
Os10t0204300-01	Rice	cytosol	4.37	60.42

Protein Annotations

KEGG:00010+4.1.1.49	KEGG:00020+4.1.1.49	KEGG:00620+4.1.1.49	KEGG:00710+4.1.1.49	Gene3D:2.170.8.10	MapMan:3.10.1
Gene3D:3.40.449.10	Gene3D:3.90.228.20	EntrezGene:4332293	ProteinID:ABF95034.1	EMBL:AK102392	ProteinID:BAF11509.1
ProteinID:BAS83324.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004611
GO:GO:0004612	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006094	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0017076
InterPro:IPR008210	InterPro:IPR013035	HAMAP:MF_00453	EnsemblPlantsGene:Os03g0255500	EnsemblPlants:Os03t0255500-01	InterPro:PEPCK_ATP_CS
InterPro:PEP_carboxykinase_ATP	InterPro:PEP_carboxykinase_C	InterPro:PEP_carboxykinase_N	PFAM:PF01293	ScanProsite:PS00532	PANTHER:PTHR30031
PANTHER:PTHR30031:SF4	UniProt:Q10NX2	SUPFAM:SSF53795	SUPFAM:SSF68923	TIGRFAMs:TIGR00224	UniParc:UPI0000DB4929
RefSeq:XP_015630689.1	SEG:seg	:	:	:	:

Description

Similar to Phosphoenolpyruvate carboxykinase 4 (EC 4.1.1.49) (Fragment). (Os03t0255500-01);Similar to Phosphoenolpyruvate carboxykinase. (Os03t0255500-02)

Coordinates

chr3:-:8218898..8224127

Molecular Weight (calculated)

73208.0 Da

IEP (calculated)

7.256

GRAVY (calculated)

-0.379

Length

663 amino acids

Sequence
(BLAST)

001: MASTPNGLAR IETHGAKTKK HENGICHDDS SAPVRAQTID ELHSLQRKRS APTTPIKDGA SSPFAAALSE EERQRQQLQS ISASLASLTR ETGPKVVRGD
101: PARKGEAAAK GAPSPHPQPV HHHHPHVTPT IAVSDSSLKF THVLYNLSPA ELYEQAIKYE KGSFITSTGA LATLSGAKTG RSPRDKRIVK DEASAQELWW
201: GKGSPNIEMD EHTFLTNRER AVDYLNSLDK VFVNDQFLNW DTENRIKVRI ISARAYHSLF MHNMCIRPTE EELEEFGTPD FTIYNAGQFP CNRYTHYMTS
301: STSVDINLAR REMVILGTQY AGEMKKGLFG VMHYLMPRRG ILSLHSGCNM GKQGDVALFF GLSGTGKTTL STDHNRLLIG DDEHCWSDTG VSNIEGGCYA
401: KCIDLSQEKE PDIWNAIKFG TVLENVVFDE HTREVDYTDK SVTENTRAAY PIEYIPNAKI PCVGPHPKNV ILLACDAFGV LPPVSKLNLP QTMYHFISGY
501: TALVAGTEDG IKEPQATFSA CFGAAFIMLH PTKYAAMLAE KMQKYGATGW LVNTGWSGGR YGVGKRIRLP YTRKIIDAIH SGELLTANYK KTEVFGLEIP
601: TEIDGIPSEI LDPINTWTDK GAYKETLLKL AGLFKKNFEV FANYKIGGDS SLTDKILAAG PNF

Best Arabidopsis Sequence Match ( AT4G37870.1 )
(BLAST)

001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F

Arabidopsis Description

PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.