CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG39751
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37870.1	EES01631	AT2G41090.1	17360592
AT4G37870.1	EES09201	AT2G41090.1	17360592
AT4G37870.1	EES16322	AT2G41090.1	17360592
AT4G37870.1	OQU78227	AT2G41090.1	17360592
AT4G37870.1	KXG39751	AT4G37870.1	21798944
AT4G37870.1	EES01631	AT5G21274.1	17360592
AT4G37870.1	EES09201	AT5G21274.1	17360592
AT4G37870.1	EES16322	AT5G21274.1	17360592
AT4G37870.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047893_P003	Maize	cytosol	97.57	97.57
Os03t0255500-01	Rice	cytosol, nucleus, plasma membrane	93.63	93.06
Zm00001d028471_P005	Maize	cytosol	94.08	92.4
TraesCS4D01G220500.1	Wheat	cytosol	91.5	90.27
TraesCS4B01G220200.1	Wheat	cytosol	91.05	89.55
VIT_00s1995g00010.t01	Wine grape	cytosol	59.33	87.67
GSMUA_Achr4P20840_001	Banana	endoplasmic reticulum	78.15	87.29
KRH52864	Soybean	cytosol	48.1	86.61
CDY31619	Canola	cytosol	69.04	84.89
TraesCS4A01G083900.1	Wheat	mitochondrion	91.5	83.52
GSMUA_Achr4P22070_001	Banana	cytosol	81.18	83.46
KRH74430	Soybean	endoplasmic reticulum	83.31	83.18
KRH39528	Soybean	nucleus	82.85	82.6
CDX72658	Canola	cytosol	78.6	81.19
CDX69339	Canola	cytosol	78.91	81.0
CDX75681	Canola	cytosol	82.09	80.87
GSMUA_Achr8P18810_001	Banana	cytosol	83.31	80.85
AT4G37870.1	Thale cress	cytosol	82.25	80.78
Bra011792.1-P	Field mustard	cytosol	81.94	80.72
Bra017856.1-P	Field mustard	cytosol	81.34	80.6
KRH75627	Soybean	cytosol	79.21	80.56
KRH45461	Soybean	nucleus	76.48	80.0
CDY08763	Canola	extracellular	32.78	79.7
Solyc04g076880.2.1	Tomato	cytosol, extracellular, nucleus, plastid	79.36	79.0
PGSC0003DMT400016354	Potato	cytosol	79.36	79.0
Solyc12g088160.1.1	Tomato	cytosol, plastid	77.85	78.8
Bra024410.1-P	Field mustard	cytosol	79.51	78.68
CDY52537	Canola	cytosol	79.67	78.59
KRH62155	Soybean	cytosol, nucleus	80.12	78.57
CDY45615	Canola	cytosol	79.36	78.53
CDY08764	Canola	cytosol	79.36	78.53
CDY37839	Canola	cytosol	79.36	78.41
Bra031848.1-P	Field mustard	cytosol	79.36	78.41
PGSC0003DMT400041521	Potato	cytosol	77.85	78.32
HORVU4Hr1G062440.2	Barley	cytosol	79.82	78.16
PGSC0003DMT400005163	Potato	cytosol	77.09	77.56
VIT_07s0205g00070.t01	Wine grape	cytosol	6.22	74.55
AT5G65690.2	Thale cress	cytosol	78.76	74.04
PGSC0003DMT400005170	Potato	cytosol	35.66	68.12
KRH37948	Soybean	cytosol	13.05	67.72
VIT_00s2576g00010.t01	Wine grape	cytosol	23.82	67.38
GSMUA_Achr4P20850_001	Banana	cytosol	8.35	46.22
VIT_00s2840g00010.t01	Wine grape	cytosol	6.07	44.94

Protein Annotations

KEGG:00010+4.1.1.49	KEGG:00020+4.1.1.49	KEGG:00620+4.1.1.49	KEGG:00710+4.1.1.49	Gene3D:2.170.8.10	MapMan:3.10.1
Gene3D:3.40.449.10	Gene3D:3.90.228.20	UniProt:A0A1B6QPA5	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004611	GO:GO:0004612	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975
GO:GO:0006094	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0017076	InterPro:IPR008210
InterPro:IPR013035	EnsemblPlants:KXG39751	ProteinID:KXG39751	ProteinID:KXG39751.1	ProteinID:KXG39752.1	HAMAP:MF_00453
InterPro:PEPCK_ATP_CS	InterPro:PEP_carboxykinase_ATP	InterPro:PEP_carboxykinase_C	InterPro:PEP_carboxykinase_N	PFAM:PF01293	ScanProsite:PS00532
PANTHER:PTHR30031	PANTHER:PTHR30031:SF4	MetaCyc:PWY-561	MetaCyc:PWY-7117	EnsemblPlantsGene:SORBI_3001G432800	SUPFAM:SSF53795
SUPFAM:SSF68923	TIGRFAMs:TIGR00224	UniParc:UPI0001C80A63	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:71152961..71158082

Molecular Weight (calculated)

72682.3 Da

IEP (calculated)

7.238

GRAVY (calculated)

-0.382

Length

659 amino acids

Sequence
(BLAST)

001: MATPNGLARI ETNGKKKHDN GVCHDDSSAP VRAQTIDELH SLQRKRSAPT TPIKDGAASP FAAALSEEER HRQQLQSISA SLASLTRETG PKVVKGDPAR
101: KGEAAAKGAP PTPQKHHQHH HPAAPTIAVS DSSLKFTHVL YNLSPAELYE QAIKYEKGSF ITSNGALATL SGAKTGRSPR DKRVVKDEAA AQELWWGKGS
201: PNIEMDEHTF LTNRERAVDY LNSLDKVFVN DQFLNWDPEN RIKVRIISAR AYHSLFMHNM CIRPTDEELE SFGTPDFTIY NAGQFPCNRY THYMTSSTSV
301: DINLARREMV ILGTQYAGEM KKGLFGVMHY LMPKRGILSL HSGCNMGKDG DVALFFGLSG TGKTTLSTDH NRLLIGDDEH CWSNNGVSNI EGGCYAKCID
401: LSQEKEPDIW NAIKFGTVLE NVVFDEHTRE VDYTDKSVTE NTRAAYPIEY IPNAKIPCVG PHPKNVILLA CDAFGVLPPV SKLNLAQTMY HFISGYTALV
501: AGTEDGIKEP QATFSACFGA AFIMLHPTKY AAMLAEKMQK YGATGWLVNT GWSGGRYGVG KRIRLPYTRK IIDAIHSGEL LTANYQKTEV FGLEIPTEIK
601: GVPSEILDPI NTWTDKAAYK ETLLRLAGLF KKNFEVFASY KIGDDSSLTD EILAAGPNF

Best Arabidopsis Sequence Match ( AT4G37870.1 )
(BLAST)

001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F

Arabidopsis Description

PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.