CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH37948
KRH39528
KRH45461
KRH52864
KRH62155
KRH74430
KRH75627

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37870.1	KRG89812	AT2G41090.1	17360592
AT4G37870.1	KRG94975	AT2G41090.1	17360592
AT4G37870.1	KRH18664	AT2G41090.1	17360592
AT4G37870.1	KRH37948	AT4G37870.1	21798944
AT4G37870.1	KRH39528	AT4G37870.1	21798944
AT4G37870.1	KRH45461	AT4G37870.1	21798944
AT4G37870.1	KRH52864	AT4G37870.1	21798944
AT4G37870.1	KRH62155	AT4G37870.1	21798944
AT4G37870.1	KRH74430	AT4G37870.1	21798944
AT4G37870.1	KRH75627	AT4G37870.1	21798944
AT4G37870.1	KRG89812	AT5G21274.1	17360592
AT4G37870.1	KRG94975	AT5G21274.1	17360592
AT4G37870.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0204300-01	Rice	cytosol	14.17	37.5
VIT_00s1995g00010.t01	Wine grape	cytosol	70.08	19.96
KRH45461	Soybean	nucleus	89.76	18.1
KRH52864	Soybean	cytosol	48.03	16.67
KRH75627	Soybean	cytosol	82.68	16.2
CDY31619	Canola	cytosol	66.93	15.86
KRH39528	Soybean	nucleus	75.59	14.52
KRH74430	Soybean	endoplasmic reticulum	74.8	14.39
TraesCS4D01G220500.1	Wheat	cytosol	70.08	13.32
TraesCS4B01G220200.1	Wheat	cytosol	70.08	13.28
HORVU4Hr1G062440.2	Barley	cytosol	70.08	13.22
KRH62155	Soybean	cytosol, nucleus	69.29	13.1
KXG39751	Sorghum	cytosol	67.72	13.05
CDX75681	Canola	cytosol	68.5	13.0
Bra017856.1-P	Field mustard	cytosol	67.72	12.93
AT4G37870.1	Thale cress	cytosol	67.72	12.82
Bra011792.1-P	Field mustard	cytosol	66.93	12.71
TraesCS4A01G083900.1	Wheat	mitochondrion	70.08	12.33
CDX69339	Canola	cytosol	50.39	9.97
CDX72658	Canola	cytosol	48.82	9.72
Zm00001d008318_P001	Maize	cytosol	7.09	4.02
GSMUA_Achr4P20850_001	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00010+4.1.1.49	KEGG:00020+4.1.1.49	KEGG:00620+4.1.1.49	KEGG:00710+4.1.1.49	Gene3D:3.90.228.20	MapMan:35.1
EMBL:ACUP02005568	EnsemblPlantsGene:GLYMA_09G100400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004611
GO:GO:0004612	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006094	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0017076	InterPro:IPR013035	UniProt:K7LCX4	EnsemblPlants:KRH37948	ProteinID:KRH37948
ProteinID:KRH37948.1	InterPro:PEP_carboxykinase_ATP	InterPro:PEP_carboxykinase_C	PFAM:PF01293	PANTHER:PTHR30031	PANTHER:PTHR30031:SF4
MetaCyc:PWY-561	MetaCyc:PWY-7117	SUPFAM:SSF53795	UniParc:UPI00023CB6E2	:	:

Description

hypothetical protein

Coordinates

chr9:-:18240109..18241071

Molecular Weight (calculated)

14004.9 Da

IEP (calculated)

5.219

GRAVY (calculated)

-0.284

Length

127 amino acids

Sequence
(BLAST)

001: MLAEKMQKHG ANGWLVNTGR SGGSYGCGNR IKLSYMRKII DAIHSGSLLD AKYKKTEIFG LESPNKVEGV PSEILEPENT WLDKQAYKDT LLELAGLFNK
101: IFETFTIGEN NQMIEEILAA GPIIGDA

Best Arabidopsis Sequence Match ( AT4G37870.1 )
(BLAST)

001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F

Arabidopsis Description

PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.