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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, plastid
BaCelLo:cytosol
ChloroP:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75681 Canola cytosol 95.23 95.52
Bra011792.1-P Field mustard cytosol 94.93 95.22
CDX69339 Canola cytosol 90.76 94.86
CDY31619 Canola cytosol 75.56 94.59
CDX72658 Canola cytosol 89.42 94.04
Bra017856.1-P Field mustard cytosol 92.85 93.68
VIT_00s1995g00010.t01 Wine grape cytosol 58.42 87.89
KRH52864 Soybean cytosol 47.54 87.16
KRH74430 Soybean endoplasmic reticulum 81.22 82.58
KRH39528 Soybean nucleus 81.07 82.3
KXG39751 Sorghum cytosol 80.78 82.25
KRH45461 Soybean nucleus 75.71 80.63
KRH75627 Soybean cytosol 77.65 80.4
TraesCS4D01G220500.1 Wheat cytosol 79.28 79.64
TraesCS4B01G220200.1 Wheat cytosol 79.28 79.4
KRH62155 Soybean cytosol, nucleus 78.84 78.72
Solyc04g076880.2.1 Tomato cytosol, extracellular, nucleus, plastid 77.5 78.55
PGSC0003DMT400016354 Potato cytosol 77.35 78.4
Solyc12g088160.1.1 Tomato cytosol, plastid 73.47 75.73
PGSC0003DMT400041521 Potato cytosol 73.62 75.42
PGSC0003DMT400005163 Potato cytosol 73.47 75.27
AT5G65690.2 Thale cress cytosol 78.39 75.04
TraesCS4A01G083900.1 Wheat mitochondrion 79.88 74.24
HORVU4Hr1G062440.2 Barley cytosol 71.24 71.03
KRH37948 Soybean cytosol 12.82 67.72
VIT_00s2576g00010.t01 Wine grape cytosol 22.95 66.09
PGSC0003DMT400005170 Potato cytosol 33.68 65.51
Zm00001d008318_P001 Maize cytosol 16.99 50.89
GSMUA_Achr4P20850_001 Banana cytosol 8.94 50.42
Os10t0204300-01 Rice cytosol 3.43 47.92
VIT_00s2840g00010.t01 Wine grape cytosol 5.66 42.7
Protein Annotations
KEGG:00010+4.1.1.49KEGG:00020+4.1.1.49KEGG:00620+4.1.1.49KEGG:00710+4.1.1.49Gene3D:2.170.8.10MapMan:3.10.1
Gene3D:3.40.449.10Gene3D:3.90.228.20EntrezGene:829943ProteinID:AEE86847.1EMBL:AF372922EMBL:AK226329
ArrayExpress:AT4G37870EnsemblPlantsGene:AT4G37870RefSeq:AT4G37870TAIR:AT4G37870RefSeq:AT4G37870-TAIR-GEnsemblPlants:AT4G37870.1
TAIR:AT4G37870.1EMBL:AY078035Unigene:At.22897ProteinID:CAB38935.1ProteinID:CAB80452.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004611GO:GO:0004612GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005730GO:GO:0005737
GO:GO:0005829GO:GO:0005975GO:GO:0006094GO:GO:0006950GO:GO:0007154GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009605GO:GO:0009607GO:GO:0009817GO:GO:0009987
GO:GO:0009991GO:GO:0016020GO:GO:0016021GO:GO:0016036GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0016829GO:GO:0016831GO:GO:0017076GO:GO:0046686InterPro:IPR008210
InterPro:IPR013035HAMAP:MF_00453RefSeq:NP_195500.1Symbol:PCK1InterPro:PEPCK_ATP_CSInterPro:PEP_carboxykinase_ATP
InterPro:PEP_carboxykinase_CInterPro:PEP_carboxykinase_NPFAM:PF01293PO:PO:0000005PO:PO:0000013PO:PO:0000014
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281ScanProsite:PS00532PANTHER:PTHR30031PANTHER:PTHR30031:SF4UniProt:Q0WWL8UniProt:Q9T074
SUPFAM:SSF53795SUPFAM:SSF68923TIGRFAMs:TIGR00224UniParc:UPI0000000AC2SEG:seg:
Description
PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
Coordinates
chr4:-:17802690..17806705
Molecular Weight (calculated)
73409.1 Da
IEP (calculated)
7.082
GRAVY (calculated)
-0.321
Length
671 amino acids
Sequence
(BLAST)
001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.