Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041521 | Potato | cytosol | 85.8 | 45.19 |
| PGSC0003DMT400005163 | Potato | cytosol | 83.48 | 43.97 |
| Solyc12g088160.1.1 | Tomato | cytosol, plastid | 82.03 | 43.47 |
| GSMUA_Achr4P20850_001 | Banana | cytosol | 13.04 | 37.82 |
| PGSC0003DMT400016354 | Potato | cytosol | 70.72 | 36.86 |
| CDX72658 | Canola | cytosol | 67.25 | 36.36 |
| CDX69339 | Canola | cytosol | 66.38 | 35.67 |
| KXG39751 | Sorghum | cytosol | 68.12 | 35.66 |
| TraesCS4D01G220500.1 | Wheat | cytosol | 67.25 | 34.73 |
| Bra017856.1-P | Field mustard | cytosol | 66.67 | 34.59 |
| Bra011792.1-P | Field mustard | cytosol | 66.38 | 34.23 |
| CDX75681 | Canola | cytosol | 66.38 | 34.23 |
| KRH62155 | Soybean | cytosol, nucleus | 66.38 | 34.08 |
| TraesCS4B01G220200.1 | Wheat | cytosol | 65.8 | 33.88 |
| AT4G37870.1 | Thale cress | cytosol | 65.51 | 33.68 |
| CDY31619 | Canola | cytosol | 51.88 | 33.4 |
| TraesCS4A01G083900.1 | Wheat | mitochondrion | 67.54 | 32.27 |
| Zm00001d008318_P001 | Maize | cytosol | 19.13 | 29.46 |
| KRH52864 | Soybean | cytosol | 30.14 | 28.42 |
| HORVU4Hr1G062440.2 | Barley | cytosol | 53.33 | 27.34 |
| Os10t0204300-01 | Rice | cytosol | 0.87 | 6.25 |
Protein Annotations
| KEGG:00010+4.1.1.49 | KEGG:00020+4.1.1.49 | KEGG:00620+4.1.1.49 | KEGG:00710+4.1.1.49 | MapMan:3.10.1 | Gene3D:3.40.449.10 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004611 | GO:GO:0004612 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005975 | GO:GO:0006094 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0017076 | InterPro:IPR008210 | UniProt:M0ZPK3 | InterPro:PEP_carboxykinase_ATP | InterPro:PEP_carboxykinase_N |
| PFAM:PF01293 | EnsemblPlantsGene:PGSC0003DMG400002042 | PGSC:PGSC0003DMG400002042 | EnsemblPlants:PGSC0003DMT400005170 | PANTHER:PTHR30031 | PANTHER:PTHR30031:SF4 |
| SUPFAM:SSF68923 | UniParc:UPI000295496B | : | : | : | : |
Description
Phosphoenolpyruvate carboxykinase [Source:PGSC_GENE;Acc:PGSC0003DMG400002042]
Coordinates
chr12:+:55962031..55964226
Molecular Weight (calculated)
38640.2 Da
IEP (calculated)
7.910
GRAVY (calculated)
-0.312
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLNNGALSN GLAKIETQKL KEEICHDDSA VPVKAHTLDE LHSLQVKKSN PNTPIIDLQQ TVFGSEADKN KQQLESISAS LASLTRETGP KVVKGDPAKQ
101: AETPKVVHAS HQHQHTPTIS NITDSALKFT HILYNLSPAE LYEQAIQNEK GSFITSSGAL ATLSGVYVND QFLNWDPMNK LKVRIVSARA YHSLFMHNMC
201: IRPTPEELEN FGTPDFTIYN AGKFPCNRYT HYMTSSTSID INLARKEMVI LGTQYAGEMK KGLFSLMHYL MPKRQILSLH SGCNMGKDGD VALFFGLSGI
301: DLTYTHYQYK DGVYCLVLIS NFVTNVFPCG RVYFRNREDY IVYRS
101: AETPKVVHAS HQHQHTPTIS NITDSALKFT HILYNLSPAE LYEQAIQNEK GSFITSSGAL ATLSGVYVND QFLNWDPMNK LKVRIVSARA YHSLFMHNMC
201: IRPTPEELEN FGTPDFTIYN AGKFPCNRYT HYMTSSTSID INLARKEMVI LGTQYAGEMK KGLFSLMHYL MPKRQILSLH SGCNMGKDGD VALFFGLSGI
301: DLTYTHYQYK DGVYCLVLIS NFVTNVFPCG RVYFRNREDY IVYRS
001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F
Arabidopsis Description
PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.