Factsheet for Bra017856.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra011792.1-P
Bra017856.1-P
Bra018296.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37870.1	Bra000214.1-P	AT2G41090.1	17360592
AT4G37870.1	Bra018296.1-P	AT3G51920.1	17360592
AT4G37870.1	Bra033467.1-P	AT3G51920.1	17360592
AT4G37870.1	Bra011792.1-P	AT4G37870.1	21798944
AT4G37870.1	Bra017856.1-P	AT4G37870.1	21798944
AT4G37870.1	Bra002368.1-P	AT5G21274.1	17360592
AT4G37870.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72658	Canola	cytosol	94.14	98.12
CDY31619	Canola	cytosol	77.44	96.08
Bra011792.1-P	Field mustard	cytosol	95.79	95.22
AT4G37870.1	Thale cress	cytosol	93.68	92.85
VIT_00s1995g00010.t01	Wine grape	cytosol	58.95	87.89
KRH52864	Soybean	cytosol	47.82	86.89
KRH74430	Soybean	endoplasmic reticulum	81.05	81.67
KRH39528	Soybean	nucleus	81.05	81.54
KXG39751	Sorghum	cytosol	80.6	81.34
KRH45461	Soybean	nucleus	75.64	79.84
KRH75627	Soybean	cytosol	77.74	79.78
TraesCS4D01G220500.1	Wheat	cytosol	79.25	78.89
Solyc04g076880.2.1	Tomato	cytosol, extracellular, nucleus, plastid	78.35	78.7
Bra024410.1-P	Field mustard	cytosol	78.65	78.53
PGSC0003DMT400016354	Potato	cytosol	78.05	78.4
TraesCS4B01G220200.1	Wheat	cytosol	78.95	78.36
Bra031848.1-P	Field mustard	cytosol	78.5	78.26
KRH62155	Soybean	cytosol, nucleus	78.5	77.68
Solyc12g088160.1.1	Tomato	cytosol, plastid	74.59	76.19
PGSC0003DMT400041521	Potato	cytosol	74.74	75.88
PGSC0003DMT400005163	Potato	cytosol	74.59	75.73
TraesCS4A01G083900.1	Wheat	mitochondrion	79.55	73.27
HORVU4Hr1G062440.2	Barley	cytosol	71.73	70.88
KRH37948	Soybean	cytosol	12.93	67.72
PGSC0003DMT400005170	Potato	cytosol	34.59	66.67
VIT_00s2576g00010.t01	Wine grape	cytosol	22.56	64.38
Zm00001d008318_P001	Maize	cytosol	17.14	50.89
Os10t0204300-01	Rice	cytosol	3.46	47.92
GSMUA_Achr4P20850_001	Banana	cytosol	8.12	45.38
VIT_00s2840g00010.t01	Wine grape	cytosol	5.86	43.82

Protein Annotations

KEGG:00010+4.1.1.49	KEGG:00020+4.1.1.49	KEGG:00620+4.1.1.49	KEGG:00710+4.1.1.49	Gene3D:2.170.8.10	MapMan:3.10.1
Gene3D:3.40.449.10	Gene3D:3.90.228.20	EnsemblPlantsGene:Bra017856	EnsemblPlants:Bra017856.1	EnsemblPlants:Bra017856.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004611	GO:GO:0004612	GO:GO:0005488	GO:GO:0005524
GO:GO:0005975	GO:GO:0006094	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0017076
InterPro:IPR008210	InterPro:IPR013035	UniProt:M4DMW9	HAMAP:MF_00453	InterPro:PEPCK_ATP_CS	InterPro:PEP_carboxykinase_ATP
InterPro:PEP_carboxykinase_C	InterPro:PEP_carboxykinase_N	PFAM:PF01293	ScanProsite:PS00532	PANTHER:PTHR30031	PANTHER:PTHR30031:SF4
SUPFAM:SSF53795	SUPFAM:SSF68923	TIGRFAMs:TIGR00224	UniParc:UPI0002540D63	SEG:seg	:

Description

AT4G37870 (E=0.0) PCK1, PEPCK | PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1); ATP binding / phosphoenolpyruvate carboxykinase (ATP)/ phosphoenolpyruvate carboxykinase/ purine nucleotide binding

Coordinates

chrA03:-:31021521..31025575

Molecular Weight (calculated)

72965.4 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.368

Length

665 amino acids

Sequence
(BLAST)

001: MSAGNGNANG DGGFSFPKGP AIPKITTGAK RDNDICQDDS GPTVKATTLD ELHSLQKKRS APTTPINQSG TAFSEEERQK IQLQSISASL ASLTRESGPK
101: VVRGDPAEKK ADGSTTPAYA HGQHQSIFSP ALGAVSDSSL KFTHVLYNLS PAELYEQAIK DEKGSFITSN GALATLSGAK TGRAPRDKRV VRDATTEDEL
201: WWGKGSPNIE MDEHTFTVNR ERAVDYLNSL EKVFVNDQFL NWDPENRIKV RIVSARAYHS LFMHNMCIRP TPEELESFGT PDFTIYNAGQ FPCNRYTHYM
301: TSSTSVDLNL SRRELVILGT QYAGEMKKGL FSVMHYLMPK RRILSLHSGC NMGKDGDVAL FFGLSGTGKT TLSTDHNRYL IGDDEHCWTE TGVSNIEGGC
401: YAKCVDLSRE KEPDIWNAIK FGTVLENVVF DEHTREVDYS DKSVTENTRA AYPIEFIPNA KIPCVGPHPK NVILLACDAF GVLPPVSKLN LAQTMYHFIS
501: GYTALVAGTE DGIKEPTGTF SACFGAAFIM LHPTKYAAML AEKMKRQGAT GWLVNTGWSG GSYGVGNRIK LAYTRKIIDA IHSGSLLEAN YKKTDIFGFE
601: IPTEIEGIPS EILDPVNSWS DKKAHKETLL KLGGLFKKNF ETFANQKIGV DGKLTEEILA AGPIF

Best Arabidopsis Sequence Match ( AT4G37870.1 )
(BLAST)

001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F

Arabidopsis Description

PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.