CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
mitochondrion 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31619	Canola	cytosol	80.44	40.67
CDY08764	Canola	cytosol	94.46	38.44
Bra024410.1-P	Field mustard	cytosol	94.1	38.29
CDY45615	Canola	cytosol	93.73	38.14
CDY37839	Canola	cytosol	91.14	37.03
CDY52537	Canola	cytosol	91.14	36.98
AT5G65690.2	Thale cress	cytosol	89.67	34.66
CDX75681	Canola	cytosol	81.18	32.88
KXG39751	Sorghum	cytosol	79.7	32.78
TraesCS4B01G220200.1	Wheat	cytosol	79.7	32.24
TraesCS4D01G220500.1	Wheat	cytosol	79.34	32.19
HORVU4Hr1G062440.2	Barley	cytosol	78.6	31.65
CDX69339	Canola	cytosol	72.69	30.69
CDX72658	Canola	cytosol	71.59	30.41
TraesCS4A01G083900.1	Wheat	mitochondrion	79.34	29.78

Protein Annotations

KEGG:00010+4.1.1.49	KEGG:00020+4.1.1.49	KEGG:00620+4.1.1.49	KEGG:00710+4.1.1.49	Gene3D:2.170.8.10	MapMan:3.10.1
Gene3D:3.90.228.20	GO:A0A078FAD5	UniProt:A0A078FAD5	EnsemblPlants:CDY08763	ProteinID:CDY08763	ProteinID:CDY08763.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004611	GO:GO:0004612	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005975	GO:GO:0006094	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0017076	EnsemblPlantsGene:GSBRNA2T00000694001	InterPro:IPR013035
InterPro:PEP_carboxykinase_ATP	InterPro:PEP_carboxykinase_C	PFAM:PF01293	PANTHER:PTHR30031	PANTHER:PTHR30031:SF4	MetaCyc:PWY-561
MetaCyc:PWY-7117	SUPFAM:SSF53795	TMHMM:TMhelix	UniPathway:UPA00138	UniParc:UPI0004EEE5F4	:

Description

BnaA06g24610DBnaA06g24610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAD5]

Coordinates

chrLK031989:-:219364..221220

Molecular Weight (calculated)

30050.1 Da

IEP (calculated)

6.343

GRAVY (calculated)

-0.048

Length

271 amino acids

Sequence
(BLAST)

001: MFRHIFIKKN SMYLAAHFCN MAILCQAFFV LENVVFDEHT REVDYNDKSV TENTRAAYPI EYIPNSKIPC VGPHPKNVIL LACDAFGVLP PISKLDLAQT
101: MYHFISGYTA LVAGTEEGVK EPRATFSACF GAAFIMLHPT KYAAMLAEKM QAQGATGWLV NTGWSGGSHG AGSRIKLAYT RKIIDAIHSG SLLNATYHKT
201: EIFGLEIPNE VEGVPYEILE PMNAWEDKEA YKDTLLKLAG LFRNNFETFT SHKIGDDGKL TEEILAAGPN F

Best Arabidopsis Sequence Match ( AT4G37870.1 )
(BLAST)

001: MSAGNGNATN GDGGFSFPKG PVMPKITTGA AKRGSGVCHD DSGPTVNATT IDELHSLQKK RSAPTTPINQ NAAAAFAAVS EEERQKIQLQ SISASLASLT
101: RESGPKVVRG DPAEKKTDGS TTPAYAHGQH HSIFSPATGA VSDSSLKFTH VLYNLSPAEL YEQAIKYEKG SFITSNGALA TLSGAKTGRA PRDKRVVRDA
201: TTEDELWWGK GSPNIEMDEH TFMVNRERAV DYLNSLEKVF VNDQYLNWDP ENRIKVRIVS ARAYHSLFMH NMCIRPTQEE LESFGTPDFT IYNAGQFPCN
301: RYTHYMTSST SVDLNLARRE MVILGTQYAG EMKKGLFSVM HYLMPKRRIL SLHSGCNMGK DGDVALFFGL SGTGKTTLST DHNRYLIGDD EHCWTETGVS
401: NIEGGCYAKC VDLSREKEPD IWNAIKFGTV LENVVFDEHT REVDYSDKSV TENTRAAYPI EFIPNAKIPC VGPHPTNVIL LACDAFGVLP PVSKLNLAQT
501: MYHFISGYTA LVAGTEDGIK EPTATFSACF GAAFIMLHPT KYAAMLAEKM KSQGATGWLV NTGWSGGSYG VGNRIKLAYT RKIIDAIHSG SLLKANYKKT
601: EIFGFEIPTE IEGIPSEILD PVNSWSDKKA HKDTLVKLGG LFKKNFEVFA NHKIGVDGKL TEEILAAGPI F

Arabidopsis Description

PCKAPhosphoenolpyruvate carboxykinase (ATP)-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WWL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.