Factsheet for HORVU5Hr1G123770.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G005350.3
HORVU1Hr1G072220.4
HORVU2Hr1G025890.1
HORVU2Hr1G030520.1
HORVU3Hr1G026700.1
HORVU3Hr1G086500.3
HORVU4Hr1G002400.5
HORVU4Hr1G059390.1
HORVU5Hr1G097280.1
HORVU6Hr1G016380.1
HORVU7Hr1G066710.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17750.1	HORVU4Hr1G002400.5	AT1G55520.1	9801140
AT4G17750.1	HORVU1Hr1G005350.3	AT2G41140.1	18466301
AT4G17750.1	HORVU2Hr1G025890.1	AT2G41140.1	18466301
AT4G17750.1	HORVU3Hr1G026700.1	AT2G41140.1	18466301
AT4G17750.1	HORVU5Hr1G097280.1	AT2G41140.1	18466301
AT4G17750.1	HORVU6Hr1G016380.1	AT2G41140.1	18466301
AT4G17750.1	HORVU7Hr1G066710.3	AT2G41140.1	18466301
AT4G17750.1	HORVU1Hr1G072220.4	AT3G12580.1	11807141
AT4G17750.1	HORVU3Hr1G086500.3	AT3G12580.1	11807141
AT4G17750.1	HORVU4Hr1G059390.1	AT3G12580.1	11807141
AT4G17750.1	HORVU4Hr1G002400.5	AT3G13445.1	9801140
AT4G17750.1	HORVU2Hr1G030520.1	AT3G19100.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G553300.1	Wheat	nucleus	85.89	94.44
TraesCS4A01G322300.1	Wheat	nucleus	85.54	94.24
TraesCS5B01G556200.1	Wheat	nucleus	85.89	93.19
Os03t0854500-01	Rice	nucleus	68.99	78.26
EER93074	Sorghum	nucleus	69.16	75.33
Zm00001d034886_P001	Maize	nucleus	65.16	70.97
Zm00001d012823_P001	Maize	nucleus	61.85	63.85
GSMUA_Achr4P04500_001	Banana	nucleus	47.39	61.96
GSMUA_Achr3P27600_001	Banana	nucleus	42.51	57.28
VIT_16s0039g01840.t01	Wine grape	nucleus, plastid	46.86	52.54
KRH74387	Soybean	nucleus	44.08	51.63
VIT_02s0012g01810.t01	Wine grape	nucleus	44.6	51.61
KRH39566	Soybean	nucleus	44.08	50.6
KRH07474	Soybean	nucleus	43.9	49.41
KRH77766	Soybean	nucleus	39.37	48.71
CDX85486	Canola	nucleus	37.28	48.42
Solyc03g097120.2.1	Tomato	nucleus	41.29	48.27
AT5G16820.2	Thale cress	nucleus	40.42	48.23
PGSC0003DMT400046000	Potato	nucleus	42.33	47.83
PGSC0003DMT400008199	Potato	nucleus	40.94	47.76
Bra023584.1-P	Field mustard	nucleus	36.59	47.51
Bra040179.1-P	Field mustard	nucleus	35.71	47.45
CDX78797	Canola	nucleus	35.54	47.44
CDY38085	Canola	nucleus	36.24	47.38
Bra021381.1-P	Field mustard	nucleus	37.11	46.92
KRH27709	Soybean	nucleus	37.8	46.77
CDY58547	Canola	nucleus	36.93	46.7
PGSC0003DMT400038381	Potato	nucleus	40.42	46.59
CDY60785	Canola	nucleus	35.37	46.45
Solyc08g076590.2.1	Tomato	nucleus	39.55	46.33
HORVU7Hr1G034320.1	Barley	nucleus, plastid	10.8	46.27
AT3G02990.1	Thale cress	nucleus	37.63	46.15
AT1G32330.1	Thale cress	nucleus	38.5	45.57
Bra032023.1-P	Field mustard	nucleus	36.06	45.39
Solyc08g005170.2.1	Tomato	nucleus	41.64	45.35
CDX92026	Canola	nucleus	35.37	45.31
Bra023258.1-P	Field mustard	nucleus	38.33	45.17
CDX93842	Canola	nucleus	38.33	45.17
Bra001071.1-P	Field mustard	nucleus	35.54	45.03
CDX74228	Canola	nucleus	35.54	44.84
CDY01288	Canola	nucleus	38.15	44.51
PGSC0003DMT400069550	Potato	nucleus	36.93	44.07
Solyc06g072750.2.1	Tomato	nucleus	36.93	43.98
CDY28731	Canola	nucleus	33.28	43.81
CDY16977	Canola	nucleus	33.62	43.76
HORVU7Hr1G055320.1	Barley	mitochondrion, nucleus	12.2	43.21
AT4G17750.1	Thale cress	nucleus	36.76	42.63
Bra008593.1-P	Field mustard	nucleus	35.71	42.44
CDX69418	Canola	nucleus	35.71	42.09
HORVU1Hr1G083420.2	Barley	nucleus	27.0	41.67
HORVU4Hr1G073650.2	Barley	nucleus	23.69	39.53
Bra035507.1-P	Field mustard	nucleus	29.09	39.11
HORVU5Hr1G094380.1	Barley	nucleus	24.04	37.2
CDY44649	Canola	nucleus	30.49	36.84
HORVU2Hr1G014590.1	Barley	nucleus	26.48	36.36
HORVU7Hr1G119990.1	Barley	nucleus	14.81	34.98
HORVU2Hr1G043030.1	Barley	nucleus	9.23	34.19
HORVU7Hr1G088920.3	Barley	nucleus	15.33	33.08
HORVU3Hr1G088890.2	Barley	nucleus	16.2	32.18
HORVU4Hr1G090090.4	Barley	nucleus, plastid	16.55	31.99
HORVU5Hr1G105770.2	Barley	nucleus	28.75	31.67
HORVU3Hr1G071550.3	Barley	nucleus	23.17	30.79
HORVU0Hr1G008940.2	Barley	cytosol, nucleus	15.68	30.72
HORVU7Hr1G087690.1	Barley	nucleus	19.34	30.41
HORVU1Hr1G081300.1	Barley	nucleus	22.82	30.39
HORVU3Hr1G055960.1	Barley	nucleus	17.25	30.28
HORVU4Hr1G090850.1	Barley	nucleus	17.6	30.06
HORVU6Hr1G017910.1	Barley	nucleus	23.87	29.98
CDX84097	Canola	nucleus	13.59	29.0
HORVU3Hr1G069590.4	Barley	nucleus, plastid	11.15	27.0

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	MapMan:26.4.2.1	UniProt:A0A287T166	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G123770	EnsemblPlants:HORVU5Hr1G123770.1	InterPro:HSF_DNA-bd
InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF162	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000B46C7AB	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:664717611..664724841

Molecular Weight (calculated)

63563.2 Da

IEP (calculated)

5.483

GRAVY (calculated)

-0.587

Length

574 amino acids

Sequence
(BLAST)

001: FIHRHLPSHC RLRWPPFLLP TPPDLKSQIQ FAAPSRIESN QLRGGGGGEA GPYGSGRRTD RGAAMEGGVA LASSVTTAVA PPGQGAGAPP PFLMKTYDMV
101: DDPATDAVVS WGPASNSFIV WNTPEFARDL LPKYFKHNNF SSFVRQLNTY GFRKVDPDKW EFANEGFLRG QKHLLKTINR RKPLHANNQV QVQQQQHQQQ
201: HQQQPQLQNA PIPSCVEVGK FGMEEEIEML KRDKNVLMQE LVRLRQQQQT TDHQLQTLGK RLHGMEQRQQ QMMSFLAKAM QSPGFLAQFV QQNENSKRRI
301: VAANKKRRLP KQDDGLNPES ALLDGQIIKY QPMINEAAKA MLRKILQQDT SPHRFESMGN SDNLLLENCM PSAQTFDSSS STRNSAVTLA EVPGNSGMPY
401: MPTSSGLSAI CSSSSPPEMQ CPPVLDSNSS TQLPNMSAVP SVPKAMTPGL SDISIPGFPD LHDLITEDAI NIPVENYAMP GPECIFPLPE GSDDSVPMDP
501: IDTDEIDDTQ KLPGIIDSFW EQFLCASPLS VDNDEVDSGL LDTREAQEEN GWTRTENLAN LTEQMGLLSS NHRG

Best Arabidopsis Sequence Match ( AT1G32330.2 )
(BLAST)

001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SR

Arabidopsis Description

HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.