Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G001310.16 | |
| HORVU3Hr1G051080.3 | |
| HORVU5Hr1G056920.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G24520.1 | HORVU2Hr1G001310.16 | AT1G19980.1 | 21798944 |
| AT3G24520.1 | HORVU3Hr1G051080.3 | AT3G01300.1 | 21798944 |
| AT3G24520.1 | HORVU5Hr1G056920.1 | AT3G01300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G055320.1 | Barley | mitochondrion, nucleus | 67.16 | 55.56 |
| HORVU2Hr1G043030.1 | Barley | nucleus | 47.01 | 40.65 |
| HORVU7Hr1G119990.1 | Barley | nucleus | 66.42 | 36.63 |
| HORVU4Hr1G090090.4 | Barley | nucleus, plastid | 77.61 | 35.02 |
| KXG29862 | Sorghum | nucleus | 67.16 | 33.71 |
| Zm00001d016255_P001 | Maize | nucleus | 64.18 | 33.46 |
| HORVU7Hr1G088920.3 | Barley | nucleus | 59.7 | 30.08 |
| Os02t0232000-01 | Rice | nucleus | 64.18 | 28.86 |
| GSMUA_Achr4P30990_001 | Banana | nucleus | 58.96 | 27.34 |
| HORVU4Hr1G090850.1 | Barley | nucleus | 65.67 | 26.19 |
| HORVU3Hr1G088890.2 | Barley | nucleus | 51.49 | 23.88 |
| GSMUA_Achr10P... | Banana | nucleus | 52.24 | 22.95 |
| HORVU3Hr1G055960.1 | Barley | nucleus | 54.48 | 22.32 |
| CDX93024 | Canola | nucleus | 48.51 | 21.24 |
| KRH39283 | Soybean | nucleus | 50.0 | 20.94 |
| Bra015050.1-P | Field mustard | nucleus | 47.76 | 20.71 |
| Bra013253.1-P | Field mustard | nucleus | 43.28 | 20.64 |
| CDY50608 | Canola | nucleus | 48.51 | 20.63 |
| CDX77420 | Canola | nucleus | 47.76 | 20.38 |
| CDY39545 | Canola | nucleus | 47.76 | 20.38 |
| CDY43158 | Canola | nucleus | 44.03 | 19.28 |
| HORVU7Hr1G087690.1 | Barley | nucleus | 52.24 | 19.18 |
| AT3G24520.1 | Thale cress | nucleus | 47.01 | 19.09 |
| VIT_11s0016g03940.t01 | Wine grape | nucleus | 46.27 | 18.84 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 47.76 | 18.6 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 50.0 | 18.06 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 50.0 | 18.01 |
| PGSC0003DMT400001025 | Potato | nucleus | 45.52 | 16.58 |
| Solyc12g007070.1.1 | Tomato | nucleus | 45.52 | 16.53 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 51.49 | 16.51 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 45.52 | 14.15 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 45.52 | 14.12 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 54.48 | 14.01 |
| HORVU3Hr1G069590.4 | Barley | nucleus, plastid | 24.63 | 13.92 |
| HORVU6Hr1G017910.1 | Barley | nucleus | 46.27 | 13.57 |
| HORVU5Hr1G123770.1 | Barley | nucleus | 46.27 | 10.8 |
| HORVU0Hr1G008940.2 | Barley | cytosol, nucleus | 17.91 | 8.19 |
| CDY43157 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | UniProt:A0A287VZS3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:HORVU7Hr1G034320 | EnsemblPlants:HORVU7Hr1G034320.1 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 |
| PFAM:PF00447 | PRINTS:PR00056 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF171 | SMART:SM00415 | SUPFAM:SSF46785 |
| UniParc:UPI000B46154C | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:+:71608216..71609049
Molecular Weight (calculated)
14707.3 Da
IEP (calculated)
9.749
GRAVY (calculated)
-0.273
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: PSSGSSGAGV AGVAPFVAKT YGMVDDRATD AIVAWRPPGN RFVVSDPFAF SQMLLPTHFK HANFSSFVWQ LNTYGFRKVD PDRWEFAHAS FHRGQTHLLR
101: HIVWRKGNNK RVKGNGAGAD GDDCDAMALA MEVV
101: HIVWRKGNNK RVKGNGAGAD GDDCDAMALA MEVV
001: MFVNFKYFSF FIRTKMDGVT GGGTNIGEAV TAPPPRNPHP ATLLNANSLP PPFLSKTYDM VEDPATDAIV SWSPTNNSFI VWDPPEFSRD LLPKYFKHNN
101: FSSFVRQLNT YGFRKVDPDR WEFANEGFLR GQKHLLKKIS RRKSVQGHGS SSSNPQSQQL SQGQGSMAAL SSCVEVGKFG LEEEVEQLKR DKNVLMQELV
201: KLRQQQQTTD NKLQVLVKHL QVMEQRQQQI MSFLAKAVQN PTFLSQFIQK QTDSNMHVTE ANKKRRLRED STAATESNSH SHSLEASDGQ IVKYQPLRND
301: SMMWNMMKTD DKYPFLDGFS SPNQVSGVTL QEVLPITSGQ SQAYASVPSG QPLSYLPSTS TSLPDTIMPE TSQIPQLTRE SINDFPTENF MDTEKNVPEA
401: FISPSPFLDG GSVPIQLEGI PEDPEIDELM SNFEFLEEYM PESPVFGDAT TLENNNNNNN NNNNNNNNNN NNNTNGRHMD KLIEELGLLT SETEH
101: FSSFVRQLNT YGFRKVDPDR WEFANEGFLR GQKHLLKKIS RRKSVQGHGS SSSNPQSQQL SQGQGSMAAL SSCVEVGKFG LEEEVEQLKR DKNVLMQELV
201: KLRQQQQTTD NKLQVLVKHL QVMEQRQQQI MSFLAKAVQN PTFLSQFIQK QTDSNMHVTE ANKKRRLRED STAATESNSH SHSLEASDGQ IVKYQPLRND
301: SMMWNMMKTD DKYPFLDGFS SPNQVSGVTL QEVLPITSGQ SQAYASVPSG QPLSYLPSTS TSLPDTIMPE TSQIPQLTRE SINDFPTENF MDTEKNVPEA
401: FISPSPFLDG GSVPIQLEGI PEDPEIDELM SNFEFLEEYM PESPVFGDAT TLENNNNNNN NNNNNNNNNN NNNTNGRHMD KLIEELGLLT SETEH
Arabidopsis Description
HSFA1AHeat stress transcription factor A-1a [Source:UniProtKB/Swiss-Prot;Acc:P41151]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.