Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G278100.1 | Wheat | nucleus | 93.31 | 94.13 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 93.31 | 94.13 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 92.44 | 93.26 |
| Os03t0161900-02 | Rice | nucleus | 71.22 | 64.64 |
| EER95463 | Sorghum | nucleus | 67.15 | 59.08 |
| Zm00001d027757_P001 | Maize | nucleus | 65.12 | 58.33 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 63.08 | 58.33 |
| Solyc06g053960.2.1 | Tomato | nucleus | 22.38 | 54.23 |
| CDX95313 | Canola | nucleus | 40.99 | 52.61 |
| Bra012829.1-P | Field mustard | nucleus | 37.79 | 52.42 |
| AT3G51910.1 | Thale cress | nucleus | 41.28 | 52.21 |
| CDX90626 | Canola | nucleus | 39.83 | 50.93 |
| Bra012828.1-P | Field mustard | nucleus | 39.83 | 50.93 |
| CDY29054 | Canola | nucleus | 38.95 | 50.57 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 44.19 | 49.35 |
| CDX90627 | Canola | nucleus | 40.12 | 48.08 |
| HORVU7Hr1G034320.1 | Barley | nucleus, plastid | 18.6 | 47.76 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 45.93 | 47.45 |
| KRH32059 | Soybean | nucleus | 46.51 | 46.92 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 47.97 | 45.71 |
| Bra007739.1-P | Field mustard | nucleus | 37.5 | 45.26 |
| CDY11470 | Canola | nucleus | 37.5 | 45.26 |
| KRG95588 | Soybean | nucleus | 48.55 | 45.14 |
| KRH67266 | Soybean | nucleus | 50.58 | 45.08 |
| KRH31657 | Soybean | nucleus | 43.31 | 44.21 |
| CDX76693 | Canola | nucleus | 36.63 | 44.21 |
| AT3G63350.1 | Thale cress | nucleus | 36.05 | 43.97 |
| HORVU7Hr1G055320.1 | Barley | mitochondrion, nucleus | 20.35 | 43.21 |
| CDX94887 | Canola | nucleus | 33.72 | 42.96 |
| PGSC0003DMT400049793 | Potato | nucleus | 45.06 | 42.58 |
| KRG91367 | Soybean | nucleus | 44.77 | 42.08 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 45.35 | 42.05 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 43.02 | 42.05 |
| PGSC0003DMT400049795 | Potato | nucleus | 43.9 | 41.94 |
| Solyc09g082670.2.1 | Tomato | nucleus | 43.31 | 41.85 |
| Solyc09g065660.2.1 | Tomato | nucleus | 45.06 | 41.67 |
| CDY14893 | Canola | nucleus | 31.69 | 41.6 |
| CDY34229 | Canola | nucleus | 45.64 | 41.42 |
| PGSC0003DMT400016511 | Potato | nucleus | 43.31 | 41.16 |
| AT5G43840.1 | Thale cress | nucleus | 33.72 | 41.13 |
| KRH35452 | Soybean | nucleus | 43.6 | 40.98 |
| Bra035993.1-P | Field mustard | nucleus | 33.14 | 40.57 |
| CDY46607 | Canola | nucleus | 43.6 | 40.43 |
| CDY10674 | Canola | nucleus | 45.35 | 40.1 |
| HORVU2Hr1G043030.1 | Barley | nucleus | 18.02 | 40.0 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 48.55 | 39.95 |
| CDY46606 | Canola | nucleus | 44.48 | 39.95 |
| Bra023800.1-P | Field mustard | nucleus | 45.64 | 39.45 |
| PGSC0003DMT400041944 | Potato | nucleus | 39.24 | 39.24 |
| CDY10311 | Canola | nucleus | 44.19 | 39.18 |
| CDX94884 | Canola | nucleus | 32.56 | 39.02 |
| AT3G22830.1 | Thale cress | nucleus | 45.64 | 38.67 |
| Bra033913.1-P | Field mustard | nucleus | 45.64 | 38.57 |
| Bra001885.1-P | Field mustard | nucleus | 43.6 | 38.36 |
| CDX92958 | Canola | nucleus | 36.63 | 36.63 |
| HORVU7Hr1G119990.1 | Barley | nucleus | 23.84 | 33.74 |
| HORVU7Hr1G088920.3 | Barley | nucleus | 25.58 | 33.08 |
| HORVU7Hr1G087690.1 | Barley | nucleus | 34.59 | 32.6 |
| HORVU4Hr1G090090.4 | Barley | nucleus, plastid | 27.62 | 31.99 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 48.26 | 31.86 |
| HORVU3Hr1G088890.2 | Barley | nucleus | 25.0 | 29.76 |
| HORVU3Hr1G055960.1 | Barley | nucleus | 26.74 | 28.13 |
| HORVU4Hr1G090850.1 | Barley | nucleus | 27.03 | 27.68 |
| HORVU6Hr1G017910.1 | Barley | nucleus | 33.72 | 25.38 |
| HORVU0Hr1G008940.2 | Barley | cytosol, nucleus | 21.22 | 24.91 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 30.81 | 24.59 |
| HORVU5Hr1G123770.1 | Barley | nucleus | 39.53 | 23.69 |
| HORVU3Hr1G069590.4 | Barley | nucleus, plastid | 15.41 | 22.36 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 27.62 | 21.99 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | UniProt:A0A287PMR3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU4Hr1G073650 | EnsemblPlants:HORVU4Hr1G073650.2 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF201 |
| SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI000B480125 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
No Description!
Coordinates
chrchr4H:+:591003287..591006153
Molecular Weight (calculated)
39918.4 Da
IEP (calculated)
4.795
GRAVY (calculated)
-0.712
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRLLLPVRV KEEWPPPPPP EEEEEELEEH RGLAPRPMVG LHETGPPPFL TKTFDLVADP ATDGVVSWGR GGNSFVVWDP HLFAAVLLPR FFKHSNFSSF
101: VRQLNTYGFR KIDPDRWEFA NEGFIRGQRQ LLKMIKRRRP LSYLPSSQQQ ALGSCLEVGQ FGFDDEIEVL KRDKNALLSE VVKLRQEQQS TRADMRAMEE
201: RLHRAEQKQL QMMGFLARAI QNPDFFLQLV QQQDKLKDLE DPYPTKRRRS INVMPFLGPE GTSQSEQLES TFIFEDREFS ELENLAMNIQ GIRKGMEDDK
301: GGRSQGCGEA ELTDDFWEEL LSEGMRDEAE MLELERRRSR YVDA
101: VRQLNTYGFR KIDPDRWEFA NEGFIRGQRQ LLKMIKRRRP LSYLPSSQQQ ALGSCLEVGQ FGFDDEIEVL KRDKNALLSE VVKLRQEQQS TRADMRAMEE
201: RLHRAEQKQL QMMGFLARAI QNPDFFLQLV QQQDKLKDLE DPYPTKRRRS INVMPFLGPE GTSQSEQLES TFIFEDREFS ELENLAMNIQ GIRKGMEDDK
301: GGRSQGCGEA ELTDDFWEEL LSEGMRDEAE MLELERRRSR YVDA
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Arabidopsis Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.