Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035993.1-P | Field mustard | nucleus | 98.86 | 92.17 |
| AT5G43840.1 | Thale cress | nucleus | 73.66 | 68.44 |
| Solyc06g053960.2.1 | Tomato | nucleus | 27.1 | 50.0 |
| CDX90626 | Canola | nucleus | 35.88 | 34.94 |
| CDY29054 | Canola | nucleus | 35.11 | 34.72 |
| CDX95313 | Canola | nucleus | 35.5 | 34.7 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 37.79 | 34.14 |
| KRH31657 | Soybean | nucleus | 43.89 | 34.12 |
| CDX90627 | Canola | nucleus | 37.02 | 33.8 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 42.37 | 33.23 |
| KRG91367 | Soybean | nucleus | 46.18 | 33.06 |
| CDX76693 | Canola | nucleus | 35.88 | 32.98 |
| CDY11470 | Canola | nucleus | 35.88 | 32.98 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 44.27 | 32.95 |
| Solyc09g082670.2.1 | Tomato | nucleus | 44.27 | 32.58 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 42.37 | 32.55 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 41.98 | 32.26 |
| KRH35452 | Soybean | nucleus | 45.04 | 32.24 |
| CDX94887 | Canola | nucleus | 33.21 | 32.22 |
| EER93298 | Sorghum | nucleus | 41.6 | 32.15 |
| PGSC0003DMT400016511 | Potato | nucleus | 44.27 | 32.04 |
| PGSC0003DMT400041944 | Potato | nucleus | 41.98 | 31.98 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 41.6 | 31.96 |
| CDY43158 | Canola | nucleus | 37.02 | 31.7 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 41.6 | 31.69 |
| EER94213 | Sorghum | nucleus | 42.37 | 30.66 |
| CDY21503 | Canola | nucleus | 40.84 | 30.66 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 40.46 | 30.64 |
| CDY34229 | Canola | nucleus | 44.27 | 30.61 |
| Zm00001d032923_P002 | Maize | nucleus | 41.6 | 30.53 |
| Os10t0419300-00 | Rice | nucleus | 41.6 | 30.45 |
| CDX94884 | Canola | nucleus | 33.21 | 30.31 |
| EER95940 | Sorghum | nucleus | 42.75 | 30.11 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 39.69 | 29.89 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 35.11 | 29.87 |
| CDY10674 | Canola | nucleus | 44.27 | 29.82 |
| CDY46606 | Canola | nucleus | 43.51 | 29.77 |
| CDY46607 | Canola | nucleus | 41.98 | 29.65 |
| Zm00001d018941_P001 | Maize | nucleus | 42.37 | 29.6 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 41.98 | 29.57 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 39.69 | 29.46 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 37.02 | 29.13 |
| CDY10311 | Canola | nucleus | 43.13 | 29.12 |
| Os07t0178600-01 | Rice | nucleus | 40.84 | 28.76 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 40.08 | 28.53 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 38.93 | 28.49 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 39.31 | 28.3 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 39.69 | 28.03 |
| Os03t0161900-02 | Rice | nucleus | 40.46 | 27.97 |
| CDX83217 | Canola | nucleus | 39.69 | 27.88 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 40.08 | 27.85 |
| CDX93024 | Canola | nucleus | 32.06 | 27.45 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 38.93 | 27.42 |
| Zm00001d027757_P001 | Maize | nucleus | 40.08 | 27.34 |
| CDX92958 | Canola | nucleus | 35.88 | 27.33 |
| EER90889 | Sorghum | nucleus | 38.55 | 27.22 |
| EER95463 | Sorghum | nucleus | 40.46 | 27.11 |
| CDX77420 | Canola | nucleus | 32.06 | 26.75 |
| CDY39545 | Canola | nucleus | 32.06 | 26.75 |
| Zm00001d033987_P001 | Maize | nucleus | 37.79 | 26.68 |
| CDY50608 | Canola | nucleus | 32.06 | 26.67 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 40.08 | 26.45 |
| CDX78797 | Canola | nucleus | 43.13 | 26.28 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 40.46 | 26.17 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 40.84 | 25.91 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 40.46 | 25.73 |
| CDY60785 | Canola | nucleus | 42.75 | 25.63 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 40.84 | 25.6 |
| CDY13041 | Canola | nucleus | 28.24 | 24.1 |
| CDY38085 | Canola | nucleus | 39.31 | 23.46 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 38.55 | 23.33 |
| CDX85486 | Canola | nucleus | 39.31 | 23.3 |
| CDX92026 | Canola | nucleus | 39.69 | 23.21 |
| CDX93842 | Canola | nucleus | 43.13 | 23.2 |
| CDX70290 | Canola | nucleus | 32.06 | 23.14 |
| CDX74228 | Canola | nucleus | 40.08 | 23.08 |
| CDY01288 | Canola | nucleus | 43.13 | 22.97 |
| CDY23108 | Canola | nucleus | 29.39 | 22.65 |
| CDX76506 | Canola | nucleus | 31.3 | 22.4 |
| CDY09259 | Canola | nucleus | 30.92 | 22.38 |
| CDY58547 | Canola | nucleus | 38.17 | 22.03 |
| CDY16977 | Canola | nucleus | 37.02 | 22.0 |
| CDY10361 | Canola | nucleus | 33.21 | 21.7 |
| CDY28731 | Canola | nucleus | 35.5 | 21.33 |
| CDX99415 | Canola | nucleus | 30.53 | 20.83 |
| CDY69818 | Canola | nucleus | 30.92 | 20.77 |
| CDX69418 | Canola | nucleus | 38.55 | 20.74 |
| CDY01562 | Canola | nucleus | 30.92 | 20.61 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 40.46 | 20.35 |
| CDY44649 | Canola | nucleus | 34.35 | 18.95 |
| CDY12723 | Canola | nucleus | 33.59 | 18.53 |
| CDY01180 | Canola | nucleus | 32.82 | 18.03 |
| Zm00001d034433_P003 | Maize | nucleus | 40.46 | 17.07 |
| CDX78902 | Canola | nucleus | 30.53 | 15.47 |
| CDX84097 | Canola | nucleus | 7.63 | 7.43 |
| CDY43157 | Canola | cytosol | 1.15 | 3.33 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078FRE1 | UniProt:A0A078FRE1 | EnsemblPlants:CDY14893 | ProteinID:CDY14893 |
| ProteinID:CDY14893.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00084799001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF262 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EDE7F1 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : | : | : |
Description
BnaA02g22350DHeat stress transcription factor A-6a [Source:Projected from Arabidopsis thaliana (AT5G43840) UniProtKB/Swiss-Prot;Acc:Q1PDN3]
Coordinates
chrLK032048:-:238790..239745
Molecular Weight (calculated)
31080.2 Da
IEP (calculated)
5.532
GRAVY (calculated)
-0.695
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYNLPTPLE VLRETGPTPF ITKAYNIVED SSTNNIVSWS RDNNSFIVWE PETFALICLP IYFKHNNFSS FVRQLNTYGF KKIDTERWEF ANEYFLRGQK
101: QLLKNIKRRK TSSQTEMLEK FGLEREIQGM RRDKAALVIE LARLRQKQES VKTYLRFMEE KLIITERKQQ MMMDFLLKKV KNPSFLENIK KRKQQEIENL
201: EQSEEMTSSH GVEDYETFVK AEPEEYGDQF GGVFGNVDEL HIASMEDQRQ DDRMCILGEH LL
101: QLLKNIKRRK TSSQTEMLEK FGLEREIQGM RRDKAALVIE LARLRQKQES VKTYLRFMEE KLIITERKQQ MMMDFLLKKV KNPSFLENIK KRKQQEIENL
201: EQSEEMTSSH GVEDYETFVK AEPEEYGDQF GGVFGNVDEL HIASMEDQRQ DDRMCILGEH LL
001: MDYNLPIPLE GLKETPPTAF LTKTYNIVED SSTNNIVSWS RDNNSFIVWE PETFALICLP RCFKHNNFSS FVRQLNTYGF KKIDTERWEF ANEHFLKGER
101: HLLKNIKRRK TSSQTQTQSL EGEIHELRRD RMALEVELVR LRRKQESVKT YLHLMEEKLK VTEVKQEMMM NFLLKKIKKP SFLQSLRKRN LQGIKNREQK
201: QEVISSHGVE DNGKFVKAEP EEYGDDIDDQ CGGVFDYGDE LHIASMEHQG QGEDEIEMDS EGIWKGFVLS EEEMCDLVEH FI
101: HLLKNIKRRK TSSQTQTQSL EGEIHELRRD RMALEVELVR LRRKQESVKT YLHLMEEKLK VTEVKQEMMM NFLLKKIKKP SFLQSLRKRN LQGIKNREQK
201: QEVISSHGVE DNGKFVKAEP EEYGDDIDDQ CGGVFDYGDE LHIASMEHQG QGEDEIEMDS EGIWKGFVLS EEEMCDLVEH FI
Arabidopsis Description
HSFA6AHeat stress transcription factor A-6a [Source:UniProtKB/Swiss-Prot;Acc:Q1PDN3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.