Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G383800.1 | Wheat | nucleus | 93.9 | 95.16 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 91.78 | 93.26 |
| EER90889 | Sorghum | nucleus | 64.72 | 65.77 |
| Zm00001d033987_P001 | Maize | nucleus | 63.66 | 64.69 |
| Solyc06g053960.2.1 | Tomato | nucleus | 21.22 | 56.34 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 39.52 | 51.38 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 43.77 | 49.4 |
| CDX95313 | Canola | nucleus | 33.69 | 47.39 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 45.62 | 47.25 |
| Bra012829.1-P | Field mustard | nucleus | 30.77 | 46.77 |
| AT3G51910.1 | Thale cress | nucleus | 33.69 | 46.69 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 41.91 | 45.4 |
| KRH31657 | Soybean | nucleus | 40.58 | 45.4 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 40.85 | 45.16 |
| CDX90626 | Canola | nucleus | 31.83 | 44.61 |
| Bra012828.1-P | Field mustard | nucleus | 31.83 | 44.61 |
| KRG91367 | Soybean | nucleus | 43.24 | 44.54 |
| CDY29054 | Canola | nucleus | 31.3 | 44.53 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 42.18 | 44.04 |
| KRG95588 | Soybean | nucleus | 41.64 | 42.43 |
| CDX90627 | Canola | nucleus | 32.1 | 42.16 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 45.36 | 41.5 |
| KRH32059 | Soybean | nucleus | 37.4 | 41.35 |
| KRH35452 | Soybean | nucleus | 40.05 | 41.26 |
| KRH67266 | Soybean | nucleus | 41.91 | 40.93 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 38.2 | 40.91 |
| CDX94887 | Canola | nucleus | 29.18 | 40.74 |
| Solyc09g082670.2.1 | Tomato | nucleus | 38.46 | 40.73 |
| CDY14893 | Canola | nucleus | 27.85 | 40.08 |
| Solyc09g065660.2.1 | Tomato | nucleus | 39.26 | 39.78 |
| PGSC0003DMT400016511 | Potato | nucleus | 38.2 | 39.78 |
| Bra035993.1-P | Field mustard | nucleus | 29.44 | 39.5 |
| AT5G43840.1 | Thale cress | nucleus | 29.44 | 39.36 |
| CDY34229 | Canola | nucleus | 39.52 | 39.31 |
| PGSC0003DMT400049793 | Potato | nucleus | 37.93 | 39.29 |
| PGSC0003DMT400049795 | Potato | nucleus | 37.4 | 39.17 |
| CDY10674 | Canola | nucleus | 40.32 | 39.07 |
| AT3G63350.1 | Thale cress | nucleus | 29.18 | 39.01 |
| CDY46607 | Canola | nucleus | 37.4 | 38.01 |
| CDX76693 | Canola | nucleus | 28.65 | 37.89 |
| CDY11470 | Canola | nucleus | 28.65 | 37.89 |
| Bra007739.1-P | Field mustard | nucleus | 28.65 | 37.89 |
| CDY46606 | Canola | nucleus | 38.46 | 37.86 |
| PGSC0003DMT400041944 | Potato | nucleus | 34.48 | 37.79 |
| CDY10311 | Canola | nucleus | 38.73 | 37.63 |
| Bra001885.1-P | Field mustard | nucleus | 38.99 | 37.6 |
| Bra033913.1-P | Field mustard | nucleus | 40.58 | 37.59 |
| Bra023800.1-P | Field mustard | nucleus | 39.52 | 37.44 |
| AT3G22830.1 | Thale cress | nucleus | 39.79 | 36.95 |
| CDX94884 | Canola | nucleus | 28.12 | 36.93 |
| TraesCS3D01G280600.1 | Wheat | nucleus | 23.08 | 36.1 |
| CDX92958 | Canola | nucleus | 32.36 | 35.47 |
| TraesCS4D01G358900.1 | Wheat | nucleus | 24.93 | 34.06 |
| TraesCS7D01G367700.1 | Wheat | nucleus | 23.61 | 33.58 |
| TraesCS3D01G385900.1 | Wheat | nucleus | 25.46 | 31.37 |
| TraesCS3D01G386000.1 | Wheat | nucleus | 25.73 | 30.89 |
| TraesCS3D01G227200.1 | Wheat | nucleus | 25.46 | 29.91 |
| TraesCS4D01G239600.1 | Wheat | nucleus | 29.97 | 29.43 |
| TraesCS5D01G553300.1 | Wheat | nucleus | 38.46 | 27.78 |
| TraesCS6D01G083800.1 | Wheat | nucleus | 29.71 | 24.45 |
| TraesCS2D01G211400.1 | Wheat | nucleus | 30.24 | 22.85 |
| TraesCS3D01G289000.1 | Wheat | nucleus | 23.34 | 21.15 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF186 | SMART:SM00415 | SUPFAM:SSF46785 | EnsemblPlantsGene:TraesCS5D01G393200 |
| EnsemblPlants:TraesCS5D01G393200.1 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5D:-:461439693..461440998
Molecular Weight (calculated)
41594.4 Da
IEP (calculated)
5.324
GRAVY (calculated)
-0.672
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPFHGIVKE EEFDFAGAAA DGYSPSSWGS SPSSWGSSQS SWAGGGALAE LPRPMDGLGE AGPTPFLNKT YEVVDDHSTD TIVSWGVAGN SFVVWDAHAF
101: SMVLLPRYFK HCNFSSFVRQ LNTYGFRKVD PDRWEFAAEG FLRGQKELLK TIRRRRPQSS PSGTPALLQQ QQQGQQGACL EVGHFGPEGE VQRLQRDKGT
201: LIAEVVKLRQ EQQATRAQMQ EMEARLAATE QKQQQMTVFL ARAMKSPSFL QMLVQRQDQS RRKELAEALL SKKRGRPIEY LLPRNGETSS AASYSAAARG
301: YGPGLADGSD GRRADGEDTE SFWKELLSLG LEERHREAGG GGGEASGAEV DDDVDDEVDE LVQSLYHLSP NRPHSHQ
101: SMVLLPRYFK HCNFSSFVRQ LNTYGFRKVD PDRWEFAAEG FLRGQKELLK TIRRRRPQSS PSGTPALLQQ QQQGQQGACL EVGHFGPEGE VQRLQRDKGT
201: LIAEVVKLRQ EQQATRAQMQ EMEARLAATE QKQQQMTVFL ARAMKSPSFL QMLVQRQDQS RRKELAEALL SKKRGRPIEY LLPRNGETSS AASYSAAARG
301: YGPGLADGSD GRRADGEDTE SFWKELLSLG LEERHREAGG GGGEASGAEV DDDVDDEVDE LVQSLYHLSP NRPHSHQ
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Arabidopsis Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.