Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90889 | Sorghum | nucleus | 87.06 | 87.06 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 64.42 | 64.42 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 64.69 | 63.66 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 63.61 | 63.44 |
| Solyc06g053960.2.1 | Tomato | nucleus | 21.83 | 57.04 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 39.08 | 50.0 |
| Bra012829.1-P | Field mustard | nucleus | 31.54 | 47.18 |
| AT3G51910.1 | Thale cress | nucleus | 34.23 | 46.69 |
| CDX95313 | Canola | nucleus | 33.69 | 46.64 |
| Zm00001d032923_P002 | Maize | nucleus | 44.74 | 46.5 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 41.78 | 46.41 |
| Zm00001d027757_P001 | Maize | nucleus | 47.17 | 45.57 |
| Zm00001d018941_P001 | Maize | nucleus | 45.28 | 44.8 |
| KRG91367 | Soybean | nucleus | 43.67 | 44.26 |
| Bra012828.1-P | Field mustard | nucleus | 31.81 | 43.87 |
| CDX90626 | Canola | nucleus | 31.81 | 43.87 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 42.59 | 43.77 |
| KRH32059 | Soybean | nucleus | 40.16 | 43.7 |
| CDY29054 | Canola | nucleus | 31.0 | 43.4 |
| KRH31657 | Soybean | nucleus | 39.35 | 43.32 |
| KRG95588 | Soybean | nucleus | 42.05 | 42.16 |
| KRH35452 | Soybean | nucleus | 41.51 | 42.08 |
| CDX90627 | Canola | nucleus | 32.34 | 41.81 |
| AT3G63350.1 | Thale cress | nucleus | 31.27 | 41.13 |
| Solyc09g082670.2.1 | Tomato | nucleus | 38.81 | 40.45 |
| KRH67266 | Soybean | nucleus | 42.05 | 40.41 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 38.27 | 40.34 |
| CDY11470 | Canola | nucleus | 30.73 | 40.0 |
| Bra007739.1-P | Field mustard | nucleus | 30.73 | 40.0 |
| CDX76693 | Canola | nucleus | 30.73 | 40.0 |
| PGSC0003DMT400016511 | Potato | nucleus | 38.54 | 39.5 |
| PGSC0003DMT400049793 | Potato | nucleus | 38.54 | 39.29 |
| Solyc09g065660.2.1 | Tomato | nucleus | 39.08 | 38.98 |
| PGSC0003DMT400049795 | Potato | nucleus | 37.47 | 38.61 |
| PGSC0003DMT400041944 | Potato | nucleus | 35.58 | 38.37 |
| AT5G43840.1 | Thale cress | nucleus | 28.84 | 37.94 |
| CDY14893 | Canola | nucleus | 26.68 | 37.79 |
| CDY10674 | Canola | nucleus | 39.35 | 37.53 |
| CDX94887 | Canola | nucleus | 27.22 | 37.41 |
| CDY34229 | Canola | nucleus | 38.01 | 37.2 |
| CDY46606 | Canola | nucleus | 38.01 | 36.81 |
| Bra033913.1-P | Field mustard | nucleus | 39.89 | 36.36 |
| CDY10311 | Canola | nucleus | 38.01 | 36.34 |
| Bra035993.1-P | Field mustard | nucleus | 27.49 | 36.3 |
| AT3G22830.1 | Thale cress | nucleus | 39.62 | 36.21 |
| CDY46607 | Canola | nucleus | 35.85 | 35.85 |
| Bra023800.1-P | Field mustard | nucleus | 38.27 | 35.68 |
| Bra001885.1-P | Field mustard | nucleus | 36.66 | 34.78 |
| Zm00001d016255_P001 | Maize | nucleus | 23.72 | 34.24 |
| CDX94884 | Canola | nucleus | 26.15 | 33.8 |
| CDX92958 | Canola | nucleus | 30.73 | 33.14 |
| Zm00001d046204_P001 | Maize | nucleus | 32.34 | 32.88 |
| Zm00001d046299_P001 | Maize | nucleus | 23.45 | 32.58 |
| Zm00001d043536_P001 | Maize | nucleus | 21.56 | 32.13 |
| Zm00001d044168_P001 | Maize | nucleus | 24.53 | 27.49 |
| Zm00001d044259_P001 | Maize | plastid | 27.22 | 26.79 |
| Zm00001d034886_P001 | Maize | nucleus | 36.66 | 25.81 |
| Zm00001d034433_P003 | Maize | nucleus | 42.86 | 25.6 |
| Zm00001d048041_P004 | Maize | nucleus | 29.92 | 24.56 |
| Zm00001d016674_P001 | Maize | nucleus | 33.15 | 24.21 |
| Zm00001d012823_P001 | Maize | nucleus | 35.58 | 23.74 |
| Zm00001d011406_P001 | Maize | nucleus | 24.53 | 23.51 |
| Zm00001d012749_P001 | Maize | nucleus | 24.53 | 21.02 |
| Zm00001d010812_P001 | Maize | nucleus | 25.34 | 20.94 |
| Zm00001d016520_P001 | Maize | nucleus | 29.38 | 20.64 |
| Zm00001d038746_P001 | Maize | nucleus | 25.88 | 20.47 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:109621226 | MapMan:15.5.13 | UniProt:A0A1D6L3W5 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 |
| ProteinID:ONM09116.1 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF186 |
| SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0008449D2B | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | EnsemblPlantsGene:Zm00001d033987 |
| EnsemblPlants:Zm00001d033987_P001 | EnsemblPlants:Zm00001d033987_T001 | SEG:seg | : | : | : |
Description
HSF-transcription factor 17Heat stress transcription factor A-6b
Coordinates
chr1:-:280368696..280370932
Molecular Weight (calculated)
41284.4 Da
IEP (calculated)
4.877
GRAVY (calculated)
-0.604
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPFHGIVKE EFDLDFDFTC ASAAAAAAAS WAVALPEMPR PMEGLGEVGP TPFLTKTYDV VDDPNTDTIV SWGFAGTSFV VWDANAFALV ILPRYFKHSN
101: FSSFVRQLNT YGFRKVDPDR WEFANEGFQR GQRELLRTIK RRRPPSSPSA QQGQAPSACL EVGQFGLDGE VHRLQRDRGI LLAEVVKLRQ EQQATRAQMQ
201: AMEKRITTAE QKQQQMTVFL ARAMKNPSFI RMLVDREGLG GCRRELEDAL SRKRRRPIEY LPRDGERSGT ATESAVSDYI SGLPVGVNGV AEADDDERRW
301: ERRGGGGGGE DTESFWAKLL NLGLEEKHRE GRCDGEEGNG ADVDNDVDDD VDVLVQSIYH LNPNPGSPGG K
101: FSSFVRQLNT YGFRKVDPDR WEFANEGFQR GQRELLRTIK RRRPPSSPSA QQGQAPSACL EVGQFGLDGE VHRLQRDRGI LLAEVVKLRQ EQQATRAQMQ
201: AMEKRITTAE QKQQQMTVFL ARAMKNPSFI RMLVDREGLG GCRRELEDAL SRKRRRPIEY LPRDGERSGT ATESAVSDYI SGLPVGVNGV AEADDDERRW
301: ERRGGGGGGE DTESFWAKLL NLGLEEKHRE GRCDGEEGNG ADVDNDVDDD VDVLVQSIYH LNPNPGSPGG K
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Arabidopsis Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.