Factsheet for Zm00001d016674_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06898	Sorghum	nucleus	88.98	91.13
Os02t0527300-01	Rice	nucleus	74.02	75.5
TraesCS2D01G211400.1	Wheat	nucleus	64.57	65.73
TraesCS2A01G204500.1	Wheat	nucleus	64.37	65.53
TraesCS2B01G232000.2	Wheat	nucleus	60.04	64.21
Zm00001d032923_P002	Maize	nucleus	25.2	35.85
Zm00001d043536_P001	Maize	nucleus	17.52	35.74
Zm00001d027757_P001	Maize	nucleus	25.79	34.11
Zm00001d033987_P001	Maize	nucleus	24.21	33.15
Zm00001d016255_P001	Maize	nucleus	16.73	33.07
Zm00001d018941_P001	Maize	nucleus	23.82	32.27
Zm00001d046299_P001	Maize	nucleus	16.73	31.84
Zm00001d044168_P001	Maize	nucleus	20.47	31.42
Zm00001d046204_P001	Maize	nucleus	22.44	31.23
Zm00001d034886_P001	Maize	nucleus	28.15	27.13
Zm00001d011406_P001	Maize	nucleus	20.08	26.36
Zm00001d012823_P001	Maize	nucleus	26.97	24.64
Zm00001d044259_P001	Maize	plastid	18.11	24.4
Zm00001d010812_P001	Maize	nucleus	21.46	24.28
Zm00001d038746_P001	Maize	nucleus	21.65	23.45
Zm00001d048041_P004	Maize	nucleus	20.87	23.45
Zm00001d012749_P001	Maize	nucleus	18.9	22.17
Zm00001d016520_P001	Maize	nucleus	21.85	21.02
Zm00001d034433_P003	Maize	nucleus	24.02	19.65

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100281577	MapMan:15.5.13	ProteinID:AQK71392.1	UniProt:B6SWQ2	ncoils:Coil
EMBL:EU957167	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd
InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF164	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000182CB5D	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
EnsemblPlantsGene:Zm00001d016674	EnsemblPlants:Zm00001d016674_P001	EnsemblPlants:Zm00001d016674_T001	SEG:seg	:	:

Description

HSF-transcription factor 6Heat shock factor protein 2

Coordinates

chr5:-:172180319..172183764

Molecular Weight (calculated)

56064.7 Da

IEP (calculated)

4.732

GRAVY (calculated)

-0.536

Length

508 amino acids

Sequence
(BLAST)

001: MHRARPTAHA NDPDAPYAAA VAMLLEPKLE DEELPLQQLA SPGPFVSLDQ LMPAVAVPAE PRPLEALLQG PQLPPFLSKT YDLVNEPALD GVISWGAAGN
101: SFVVWDPSTF ARDVLPHNFK HNNFSSFVRQ LNTYGFRKVH ADRWEFAHED FLRDSKHLLK RIVRRRSSPT KQSSVQPGSS SGESSLDPEL HTLRREKNAL
201: LEEVARLKQE HRQTIEQMST LNHRLESAED RQRQMVSFLA KLLQNPSFVR KLKLHREKKE IDSTRVKRKF LKHVPHGSVE SGESSSQHAG ENGSYFAVSS
301: PMATTTSVHD DITELQNFLL EDDDLNFGMD SENTGLEGTE ATDDIGELIQ GFDTQEELDL GSGAELQEMP PASGPLARDP TIGRFKGKNV LCPGLDATSS
401: EGDCLSPLPD NMGLLSGTML GTAGSMMAAD DEQIWGVDAS AALQSSCSGT SQQAFGSHAS DPYLMDIANR PERFWELDFQ ALDEADLQLD KCAIDDPALQ
501: QQPSMKKL

Best Arabidopsis Sequence Match ( AT5G03720.1 )
(BLAST)

001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP

Arabidopsis Description

HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.