Factsheet for Zm00001d012749_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01479	Sorghum	nucleus	90.53	90.32
Os01t0749300-02	Rice	nucleus	75.29	74.09
TraesCS3A01G289200.1	Wheat	nucleus	70.67	70.83
HORVU3Hr1G071550.3	Barley	nucleus	69.98	70.14
TraesCS3B01G323800.1	Wheat	nucleus	70.9	69.61
TraesCS3D01G289000.1	Wheat	nucleus	66.74	69.47
VIT_12s0028g01410.t01	Wine grape	nucleus	42.49	49.86
GSMUA_Achr3P15640_001	Banana	nucleus	50.58	48.34
GSMUA_Achr8P27750_001	Banana	nucleus	24.48	47.96
AT5G45710.3	Thale cress	nucleus	37.18	46.67
CDY23108	Canola	nucleus	35.1	44.71
Bra017595.1-P	Field mustard	nucleus	34.87	44.41
KRH21206	Soybean	nucleus	39.95	44.13
CDY09259	Canola	nucleus	36.72	43.92
VIT_10s0003g01770.t01	Wine grape	nucleus	35.1	43.8
CDX76506	Canola	nucleus	36.95	43.72
CDY13041	Canola	nucleus	30.95	43.65
KRH11063	Soybean	nucleus	39.49	43.62
Bra020988.1-P	Field mustard	nucleus	34.64	42.98
KRH42919	Soybean	nucleus	39.72	42.79
CDX99415	Canola	nucleus	37.88	42.71
AT4G18880.1	Thale cress	nucleus	39.49	42.64
KRH59030	Soybean	nucleus	39.49	42.54
Solyc03g006000.2.1	Tomato	nucleus	39.26	42.39
PGSC0003DMT400071487	Potato	nucleus	39.03	41.94
GSMUA_Achr6P31750_001	Banana	nucleus	46.65	41.56
Bra012571.1-P	Field mustard	nucleus	37.18	41.28
PGSC0003DMT400044683	Potato	nucleus	39.26	41.26
Solyc07g055710.2.1	Tomato	nucleus	36.95	41.24
CDY01562	Canola	nucleus	37.41	41.22
CDY69818	Canola	nucleus	36.95	41.03
Solyc02g072000.2.1	Tomato	nucleus	38.57	40.93
Zm00001d010812_P001	Maize	nucleus	39.49	38.08
Zm00001d038746_P001	Maize	nucleus	37.18	34.33
Zm00001d016255_P001	Maize	nucleus	18.01	30.35
Zm00001d032923_P002	Maize	nucleus	24.94	30.25
Zm00001d046299_P001	Maize	nucleus	18.01	29.21
Bra013358.1-P	Field mustard	nucleus	34.87	29.21
CDX78902	Canola	nucleus	34.87	29.21
Zm00001d018941_P001	Maize	nucleus	24.71	28.53
Zm00001d043536_P001	Maize	nucleus	15.94	27.71
Zm00001d016520_P001	Maize	nucleus	33.26	27.27
Zm00001d027757_P001	Maize	nucleus	24.02	27.08
Zm00001d044168_P001	Maize	nucleus	20.32	26.59
Zm00001d034886_P001	Maize	nucleus	31.18	25.62
Zm00001d033987_P001	Maize	nucleus	21.02	24.53
Zm00001d046204_P001	Maize	nucleus	20.09	23.84
Zm00001d012823_P001	Maize	nucleus	30.48	23.74
Zm00001d011406_P001	Maize	nucleus	20.32	22.74
Zm00001d044259_P001	Maize	plastid	18.01	20.69
Zm00001d048041_P004	Maize	nucleus	20.55	19.69
Zm00001d016674_P001	Maize	nucleus	22.17	18.9
Zm00001d034433_P003	Maize	nucleus	26.1	18.2

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:103636652	MapMan:15.5.13	ProteinID:AQL00511.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388
UniProt:K7W4M8	EMBL:KJ728058	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF154	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000221980B	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
EnsemblPlantsGene:Zm00001d012749	EnsemblPlants:Zm00001d012749_P001	EnsemblPlants:Zm00001d012749_T001	:	:	:

Description

heat shock transcription factor2 heat shock transcription factor2

Coordinates

chr8:-:179671303..179673854

Molecular Weight (calculated)

48650.2 Da

IEP (calculated)

5.086

GRAVY (calculated)

-0.842

Length

433 amino acids

Sequence
(BLAST)

001: MEGASSLPPF LSKTYEMVDD PATDAVVAWT PLGTSFVVAN QAEFCRDLLP KYFKHNNFSS FVRQLNTYGF KKIDPEQWEF ANDDFIRGQQ HRLKNIHRRK
101: PIFSHSSHTQ GSGPLPDTER RDYEEEIERL KCDNAALTSE LEKNAQKKLV TEKRMQELED KLIFLEDRQK NLMAYVRDIV QAPGSFSSFV QQPDHHGKKR
201: RLPVPISLYQ DSNAEGNQVV HGGFITNPPA CRESFDKTES SLNSLENFLR EASEAFNISY GDGLPGPSSA VVITELHSSG ESDPHVPSPV SRMHTSSAGA
301: GDSLSSRDLT ESTSCAESPR LAQIQPCTDS RTKVSEIDVN REPAVTETGP TRDQPAEEPP HVAAGVNDGF WQQFLTEQPG PDVHQEAQSE RRDGDDDKGD
401: QTRIGDRENF WWGKKNVEQM REKLGRLTSV EKT

Best Arabidopsis Sequence Match ( AT5G45710.1 )
(BLAST)

001: MDENNGGSSS LPPFLTKTYE MVDDSSSDSV VAWSENNKSF IVKNPAEFSR DLLPRFFKHK NFSSFIRQLN TYGFRKVDPE KWEFLNDDFV RGRPYLMKNI
101: HRRKPVHSHS LVNLQAQNPL TESERRSMED QIERLKNEKE GLLAELQNQE QERKEFELQV TTLKDRLQHM EQHQKSIVAY VSQVLGKPGL SLNLENHERR
201: KRRFQENSLP PSSSHIEQVE KLESSLTFWE NLVSESCEKS GLQSSSMDHD AAESSLSIGD TRPKSSKIDM NSEPPVTVTA PAPKTGVNDD FWEQCLTENP
301: GSTEQQEVQS ERRDVGNDNN GNKIGNQRTY WWNSGNVNNI TEKAS

Arabidopsis Description

HSFA4CRHA1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPK9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.