Factsheet for TraesCS3B01G323800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G289200.1	Wheat	nucleus	95.01	96.99
TraesCS3D01G289000.1	Wheat	nucleus	88.66	93.99
HORVU3Hr1G071550.3	Barley	nucleus	89.8	91.67
Os01t0749300-02	Rice	nucleus	73.92	74.09
EES01479	Sorghum	nucleus	71.88	73.04
Zm00001d012749_P001	Maize	nucleus	69.61	70.9
GSMUA_Achr3P15640_001	Banana	nucleus	48.75	47.46
VIT_12s0028g01410.t01	Wine grape	nucleus	39.23	46.88
GSMUA_Achr8P27750_001	Banana	nucleus	23.13	46.15
CDY13041	Canola	nucleus	31.75	45.6
CDY23108	Canola	nucleus	34.92	45.29
AT5G45710.3	Thale cress	nucleus	35.37	45.22
Bra017595.1-P	Field mustard	nucleus	34.69	45.0
VIT_10s0003g01770.t01	Wine grape	nucleus	34.47	43.8
CDX76506	Canola	nucleus	35.83	43.17
CDY09259	Canola	nucleus	35.37	43.09
Bra020988.1-P	Field mustard	nucleus	33.33	42.12
KRH21206	Soybean	nucleus	37.19	41.84
KRH11063	Soybean	nucleus	36.96	41.58
Bra012571.1-P	Field mustard	nucleus	36.73	41.54
CDX99415	Canola	nucleus	36.05	41.41
AT4G18880.1	Thale cress	nucleus	37.64	41.4
CDY69818	Canola	nucleus	36.51	41.28
CDY01562	Canola	nucleus	36.73	41.22
GSMUA_Achr6P31750_001	Banana	nucleus	45.12	40.95
KRH42919	Soybean	nucleus	36.96	40.55
Solyc07g055710.2.1	Tomato	nucleus	35.6	40.46
PGSC0003DMT400071487	Potato	nucleus	36.96	40.45
KRH59030	Soybean	nucleus	36.73	40.3
Solyc03g006000.2.1	Tomato	nucleus	36.51	40.15
PGSC0003DMT400044683	Potato	nucleus	37.41	40.05
Solyc02g072000.2.1	Tomato	nucleus	36.73	39.71
TraesCS4B01G383200.1	Wheat	nucleus	17.01	32.47
TraesCS3B01G314600.1	Wheat	nucleus	16.33	31.72
TraesCS7B01G272500.1	Wheat	nucleus	18.14	30.42
TraesCS1B01G396000.1	Wheat	nucleus	24.04	29.61
TraesCS4B01G383300.1	Wheat	nucleus	18.37	29.45
TraesCS3B01G568200.1	Wheat	nucleus	15.19	29.26
TraesCS6B01G127000.1	Wheat	nucleus	30.16	29.23
TraesCS4B01G278100.1	Wheat	nucleus	22.45	29.03
TraesCS4B01G385800.1	Wheat	nucleus	17.91	28.94
Bra013358.1-P	Field mustard	nucleus	33.79	28.82
CDX78902	Canola	nucleus	33.79	28.82
TraesCS4B01G383400.1	Wheat	nucleus	17.23	28.36
TraesCS5B01G440700.1	Wheat	nucleus	22.68	28.33
TraesCS3B01G568300.1	Wheat	nucleus	17.46	28.1
TraesCS2B01G105100.1	Wheat	nucleus	23.81	25.93
TraesCS3B01G255600.1	Wheat	nucleus	18.82	25.54
TraesCS3B01G425200.1	Wheat	nucleus	17.46	25.33
TraesCS5B01G556200.1	Wheat	nucleus	29.93	24.95
TraesCS4B01G239700.1	Wheat	nucleus	20.86	23.96
TraesCS7B01G267300.1	Wheat	nucleus	19.05	23.8
TraesCS3B01G438900.1	Wheat	nucleus	19.95	20.32
TraesCS2B01G232000.2	Wheat	nucleus	21.77	20.21

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056
ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF154	SMART:SM00415	SUPFAM:SSF46785	EnsemblPlantsGene:TraesCS3B01G323800
EnsemblPlants:TraesCS3B01G323800.1	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	:	:	:

Description

No Description!

Coordinates

chr3B:+:524325411..524327639

Molecular Weight (calculated)

49462.8 Da

IEP (calculated)

5.023

GRAVY (calculated)

-0.848

Length

441 amino acids

Sequence
(BLAST)

001: MEGSGGSASL PPFLTKTYEM VDEPATDAVV AWTPSGTSFV VLSQADFCRD LLPKYFKHNN FSSFVRQLNT YGFRKVDPEQ WEFANEEFIR DQRHRLKNIH
101: RRKPIFSHSS HTQGAGPLAD SERRDYDEEI ERLKCDNASL KLQLERKKTD MESKMKALED KLFAIEDQQK NLISYVREIV NAPGFFSSFV EQSDHQGKKR
201: RLPKPISFHE DTSTQGNQIM HCDLVNSPTH ELFRASFDKM ESSLNSLENF FKEASEAFGN DVSYDGDVPG HSSAVVLTEL HSSAESEPLH SSAESEPHEQ
301: SPPSMMHTCS AGVGDSHSSR DIAESASCPE SPPLPEAHSR ADSRAKVSEI DVNLEPAVTE TGPSRDQQPT QDPPADANDG FWQQFLTEQP GLSHAHQEAQ
401: SERRDREANQ TTAGDRGSFW WGKSVEQMTE KLGHLTSAEK T

Best Arabidopsis Sequence Match ( AT5G45710.1 )
(BLAST)

001: MDENNGGSSS LPPFLTKTYE MVDDSSSDSV VAWSENNKSF IVKNPAEFSR DLLPRFFKHK NFSSFIRQLN TYGFRKVDPE KWEFLNDDFV RGRPYLMKNI
101: HRRKPVHSHS LVNLQAQNPL TESERRSMED QIERLKNEKE GLLAELQNQE QERKEFELQV TTLKDRLQHM EQHQKSIVAY VSQVLGKPGL SLNLENHERR
201: KRRFQENSLP PSSSHIEQVE KLESSLTFWE NLVSESCEKS GLQSSSMDHD AAESSLSIGD TRPKSSKIDM NSEPPVTVTA PAPKTGVNDD FWEQCLTENP
301: GSTEQQEVQS ERRDVGNDNN GNKIGNQRTY WWNSGNVNNI TEKAS

Arabidopsis Description

HSFA4CRHA1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPK9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.