Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69818 | Canola | nucleus | 95.42 | 96.15 |
| CDX76506 | Canola | nucleus | 78.88 | 84.7 |
| CDY09259 | Canola | nucleus | 77.86 | 84.53 |
| CDX99415 | Canola | nucleus | 80.66 | 82.55 |
| AT4G18880.1 | Thale cress | nucleus | 83.21 | 81.55 |
| CDY13041 | Canola | nucleus | 50.89 | 65.15 |
| CDY23108 | Canola | nucleus | 53.18 | 61.47 |
| CDX78902 | Canola | nucleus | 77.86 | 59.19 |
| KRH11063 | Soybean | nucleus | 54.45 | 54.59 |
| KRH21206 | Soybean | nucleus | 54.45 | 54.59 |
| VIT_10s0003g01770.t01 | Wine grape | nucleus | 47.58 | 53.89 |
| KRH42919 | Soybean | nucleus | 54.45 | 53.23 |
| KRH59030 | Soybean | nucleus | 53.69 | 52.49 |
| GSMUA_Achr8P27750_001 | Banana | nucleus | 26.72 | 47.51 |
| Solyc02g072000.2.1 | Tomato | nucleus | 48.6 | 46.81 |
| Solyc03g006000.2.1 | Tomato | nucleus | 47.33 | 46.38 |
| PGSC0003DMT400071487 | Potato | nucleus | 47.07 | 45.91 |
| EES01479 | Sorghum | nucleus | 42.24 | 38.25 |
| Os01t0749300-02 | Rice | nucleus | 42.49 | 37.95 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 41.22 | 37.5 |
| TraesCS3A01G289200.1 | Wheat | nucleus | 41.22 | 37.5 |
| Zm00001d012749_P001 | Maize | nucleus | 41.22 | 37.41 |
| TraesCS3B01G323800.1 | Wheat | nucleus | 41.22 | 36.73 |
| GSMUA_Achr3P15640_001 | Banana | nucleus | 40.46 | 35.1 |
| TraesCS3D01G289000.1 | Wheat | nucleus | 37.15 | 35.1 |
| CDX90626 | Canola | nucleus | 23.92 | 34.94 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 38.17 | 34.8 |
| CDY29054 | Canola | nucleus | 23.41 | 34.72 |
| GSMUA_Achr6P31750_001 | Banana | nucleus | 42.75 | 34.57 |
| Zm00001d010812_P001 | Maize | nucleus | 38.68 | 33.85 |
| TraesCS1A01G350400.2 | Wheat | nucleus | 37.91 | 33.63 |
| CDX95313 | Canola | nucleus | 22.9 | 33.58 |
| CDX90627 | Canola | nucleus | 23.92 | 32.75 |
| Os05t0530400-01 | Rice | nucleus | 38.17 | 32.68 |
| EES18551 | Sorghum | nucleus | 39.44 | 32.56 |
| CDY43158 | Canola | nucleus | 24.94 | 32.03 |
| Zm00001d038746_P001 | Maize | nucleus | 37.91 | 31.77 |
| CDX94887 | Canola | nucleus | 21.63 | 31.48 |
| CDY14893 | Canola | nucleus | 20.61 | 30.92 |
| CDY11470 | Canola | nucleus | 22.39 | 30.88 |
| CDX76693 | Canola | nucleus | 21.88 | 30.18 |
| CDX94884 | Canola | nucleus | 21.88 | 29.97 |
| CDY10311 | Canola | nucleus | 27.99 | 28.35 |
| CDY34229 | Canola | nucleus | 27.23 | 28.23 |
| CDY10674 | Canola | nucleus | 27.74 | 28.02 |
| CDY46606 | Canola | nucleus | 26.97 | 27.68 |
| CDY21503 | Canola | nucleus | 24.43 | 27.51 |
| CDY46607 | Canola | nucleus | 25.95 | 27.49 |
| CDX78797 | Canola | nucleus | 30.03 | 27.44 |
| CDX85486 | Canola | nucleus | 30.79 | 27.38 |
| CDX92958 | Canola | nucleus | 23.92 | 27.33 |
| CDX92026 | Canola | nucleus | 30.53 | 26.79 |
| CDY60785 | Canola | nucleus | 29.77 | 26.77 |
| CDY12723 | Canola | nucleus | 32.32 | 26.74 |
| CDY28731 | Canola | nucleus | 29.52 | 26.61 |
| CDX74228 | Canola | nucleus | 30.79 | 26.59 |
| CDY38085 | Canola | nucleus | 29.52 | 26.42 |
| CDY01180 | Canola | nucleus | 32.06 | 26.42 |
| CDY58547 | Canola | nucleus | 30.28 | 26.21 |
| CDY16977 | Canola | nucleus | 29.26 | 26.08 |
| CDX83217 | Canola | nucleus | 24.68 | 26.01 |
| CDX93024 | Canola | nucleus | 20.1 | 25.82 |
| CDY50608 | Canola | nucleus | 20.1 | 25.08 |
| CDX77420 | Canola | nucleus | 19.85 | 24.84 |
| CDY39545 | Canola | nucleus | 19.59 | 24.52 |
| CDX70290 | Canola | nucleus | 22.65 | 24.52 |
| CDX69418 | Canola | nucleus | 30.28 | 24.44 |
| CDY10361 | Canola | nucleus | 22.9 | 22.44 |
| CDX93842 | Canola | nucleus | 27.48 | 22.18 |
| CDY01288 | Canola | nucleus | 27.48 | 21.95 |
| CDY43157 | Canola | cytosol | 4.33 | 18.89 |
| CDY44649 | Canola | nucleus | 19.08 | 15.79 |
| CDX84097 | Canola | nucleus | 3.31 | 4.83 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078EK87 | EnsemblPlants:CDY01562 | ProteinID:CDY01562 | ProteinID:CDY01562.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00112601001 |
| InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | PANTHER:PTHR10015 |
| PANTHER:PTHR10015:SF154 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EEA7EC | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g35520D
Coordinates
chrLK031927:-:661286..662832
Molecular Weight (calculated)
45045.4 Da
IEP (calculated)
5.054
GRAVY (calculated)
-0.893
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESSHGGSS STSLPPFLTK TYEMVDDSSS DSIVSWSQSN KSFIVWNPPE FSRDLLPKFF KHNNFSSFIR QLNTYGFRKA DPEQWEFAND DFVRGQPHLM
101: KNIHRRKPVH SHSLPNLQSQ QNPLTDSERQ RMNSQIERLT TEKQVLLEEL HKHEEERELF EQQVKKLKDQ LHHMEKRQRT MVSSVSQVLE KPELALNLSP
201: CLPEANERKR RFPRVGLETM LEENHQTCGA VREEGSTSTS SHDATECQVE RLESSIAIWE NLVSDSCESM AQQSTRNMMT LDVDESSTCP ESPPLSCIQL
301: SIDIRLKSPP SPRTIDMNSE PDVSKEQNVV PPDPSPPAVG ANDVFWQQLL TENPGSTEQR EVQSEKAEDR SEKCWWNSRN VNTITEQLGH LTS
101: KNIHRRKPVH SHSLPNLQSQ QNPLTDSERQ RMNSQIERLT TEKQVLLEEL HKHEEERELF EQQVKKLKDQ LHHMEKRQRT MVSSVSQVLE KPELALNLSP
201: CLPEANERKR RFPRVGLETM LEENHQTCGA VREEGSTSTS SHDATECQVE RLESSIAIWE NLVSDSCESM AQQSTRNMMT LDVDESSTCP ESPPLSCIQL
301: SIDIRLKSPP SPRTIDMNSE PDVSKEQNVV PPDPSPPAVG ANDVFWQQLL TENPGSTEQR EVQSEKAEDR SEKCWWNSRN VNTITEQLGH LTS
001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
Arabidopsis Description
HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.