CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012749_P001	Maize	nucleus	90.32	90.53
Os01t0749300-02	Rice	nucleus	79.26	78.18
TraesCS3A01G289200.1	Wheat	nucleus	73.04	73.38
HORVU3Hr1G071550.3	Barley	nucleus	72.58	72.92
TraesCS3D01G289000.1	Wheat	nucleus	69.12	72.12
TraesCS3B01G323800.1	Wheat	nucleus	73.04	71.88
VIT_12s0028g01410.t01	Wine grape	nucleus	42.86	50.41
GSMUA_Achr3P15640_001	Banana	nucleus	50.92	48.79
GSMUA_Achr8P27750_001	Banana	nucleus	24.19	47.51
AT5G45710.3	Thale cress	nucleus	37.56	47.25
CDY23108	Canola	nucleus	35.94	45.88
KRH21206	Soybean	nucleus	41.01	45.41
KRH11063	Soybean	nucleus	41.01	45.41
Bra017595.1-P	Field mustard	nucleus	35.48	45.29
VIT_10s0003g01770.t01	Wine grape	nucleus	35.94	44.96
CDY13041	Canola	nucleus	31.57	44.63
CDX76506	Canola	nucleus	37.33	44.26
CDY09259	Canola	nucleus	36.87	44.2
Bra020988.1-P	Field mustard	nucleus	34.79	43.27
CDX99415	Canola	nucleus	38.25	43.23
KRH59030	Soybean	nucleus	39.63	42.79
Solyc03g006000.2.1	Tomato	nucleus	39.4	42.64
GSMUA_Achr6P31750_001	Banana	nucleus	47.7	42.59
KRH42919	Soybean	nucleus	39.4	42.54
Solyc07g055710.2.1	Tomato	nucleus	38.02	42.53
AT4G18880.1	Thale cress	nucleus	39.17	42.39
CDY01562	Canola	nucleus	38.25	42.24
PGSC0003DMT400071487	Potato	nucleus	39.17	42.18
Bra012571.1-P	Field mustard	nucleus	37.79	42.05
CDY69818	Canola	nucleus	37.56	41.79
Solyc02g072000.2.1	Tomato	nucleus	38.71	41.18
PGSC0003DMT400044683	Potato	nucleus	38.94	41.02
EES18551	Sorghum	nucleus	39.4	35.92
EER93298	Sorghum	nucleus	25.12	32.15
KXG29862	Sorghum	nucleus	19.59	31.84
EER89919	Sorghum	nucleus	19.82	30.82
EER94213	Sorghum	nucleus	25.35	30.39
KXG33312	Sorghum	nucleus	18.2	30.38
Bra013358.1-P	Field mustard	nucleus	35.71	29.98
CDX78902	Canola	nucleus	35.71	29.98
EER95940	Sorghum	nucleus	25.35	29.57
EES05094	Sorghum	nucleus	32.26	28.87
EER93074	Sorghum	nucleus	33.41	27.51
EER90889	Sorghum	nucleus	22.12	25.88
EER95463	Sorghum	nucleus	22.81	25.32
EES00942	Sorghum	plastid	21.89	24.11
EES01103	Sorghum	nucleus	20.28	24.11
KXG20211	Sorghum	nucleus	21.43	22.3
EER95242	Sorghum	nucleus	20.74	21.69
EES06898	Sorghum	nucleus	22.81	19.96

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EntrezGene:8072075	UniProt:C5XK40	ncoils:Coil	EnsemblPlants:EES01479
ProteinID:EES01479	ProteinID:EES01479.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434
PANTHER:PTHR10015	PANTHER:PTHR10015:SF154	SMART:SM00415	EnsemblPlantsGene:SORBI_3003G295900	SUPFAM:SSF46785	unigene:Sbi.6301
UniParc:UPI0001A849B3	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002456359.1	:	:

Description

hypothetical protein

Coordinates

chr3:+:62795505..62798139

Molecular Weight (calculated)

48353.9 Da

IEP (calculated)

4.939

GRAVY (calculated)

-0.795

Length

434 amino acids

Sequence
(BLAST)

001: MEAGGGGASS LPPFLSKTYE MVDDPATDAV VAWTPPGTSF VVANQAEFCR DLLPKYFKHN NFSSFVRQLN TYGFRKIDPE QWEFANEDFI RGQQHRLKNI
101: HRRKPIFSHS SHTGSGPLAD TERRDYEEEI ERLKSDNAAL TSELENNAQK KLVTEKRMQD LEDKLIFLED RQKNLMAYVR DIVQAPGFLA SFVQQPDHHG
201: KKRRLPIPIS LHQDANTEGN QIVHGGLTDP PACRESFDKM ESSLNSLESF LREASEAFNI SYDDGLPGPS SAVVITELHS SGESDPHVPS PVSRMHTSSA
301: GAGDSLSSRD VTGSTSCAES PPLPQMQSCT DPRTKVSEID VNMEPAVTET GLSRDQPVEE PPHAATGVND GFWQQFLTEQ PGSDAHQEAQ SERRDGDDKG
401: DQTRIGDREK FWWGKKNVEQ MTEKLGHLTS VEKT

Best Arabidopsis Sequence Match ( AT5G45710.1 )
(BLAST)

001: MDENNGGSSS LPPFLTKTYE MVDDSSSDSV VAWSENNKSF IVKNPAEFSR DLLPRFFKHK NFSSFIRQLN TYGFRKVDPE KWEFLNDDFV RGRPYLMKNI
101: HRRKPVHSHS LVNLQAQNPL TESERRSMED QIERLKNEKE GLLAELQNQE QERKEFELQV TTLKDRLQHM EQHQKSIVAY VSQVLGKPGL SLNLENHERR
201: KRRFQENSLP PSSSHIEQVE KLESSLTFWE NLVSESCEKS GLQSSSMDHD AAESSLSIGD TRPKSSKIDM NSEPPVTVTA PAPKTGVNDD FWEQCLTENP
301: GSTEQQEVQS ERRDVGNDNN GNKIGNQRTY WWNSGNVNNI TEKAS

Arabidopsis Description

HSFA4CRHA1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPK9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.