Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400071487 | Potato | nucleus | 97.26 | 96.77 |
Solyc02g072000.2.1 | Tomato | nucleus | 71.32 | 70.1 |
VIT_10s0003g01770.t01 | Wine grape | nucleus | 49.63 | 57.35 |
KRH21206 | Soybean | nucleus | 52.37 | 53.57 |
KRH42919 | Soybean | nucleus | 53.37 | 53.23 |
KRH11063 | Soybean | nucleus | 51.37 | 52.55 |
KRH59030 | Soybean | nucleus | 51.62 | 51.49 |
CDY13041 | Canola | nucleus | 39.4 | 51.47 |
AT5G45710.3 | Thale cress | nucleus | 43.14 | 50.14 |
Bra017595.1-P | Field mustard | nucleus | 42.39 | 50.0 |
CDY09259 | Canola | nucleus | 44.64 | 49.45 |
CDY23108 | Canola | nucleus | 41.65 | 49.12 |
CDX99415 | Canola | nucleus | 46.88 | 48.96 |
CDX76506 | Canola | nucleus | 44.64 | 48.91 |
Bra020988.1-P | Field mustard | nucleus | 42.14 | 48.42 |
AT4G18880.1 | Thale cress | nucleus | 48.13 | 48.13 |
CDY69818 | Canola | nucleus | 46.13 | 47.44 |
CDY01562 | Canola | nucleus | 46.38 | 47.33 |
Bra012571.1-P | Field mustard | nucleus | 45.89 | 47.18 |
Solyc06g053960.2.1 | Tomato | nucleus | 16.21 | 45.77 |
GSMUA_Achr8P27750_001 | Banana | nucleus | 24.94 | 45.25 |
Solyc07g055710.2.1 | Tomato | nucleus | 40.65 | 42.01 |
EES01479 | Sorghum | nucleus | 42.64 | 39.4 |
Zm00001d012749_P001 | Maize | nucleus | 42.39 | 39.26 |
Os01t0749300-02 | Rice | nucleus | 41.9 | 38.18 |
GSMUA_Achr3P15640_001 | Banana | nucleus | 42.64 | 37.75 |
HORVU3Hr1G071550.3 | Barley | nucleus | 40.4 | 37.5 |
TraesCS3A01G289200.1 | Wheat | nucleus | 40.4 | 37.5 |
GSMUA_Achr6P31750_001 | Banana | nucleus | 44.64 | 36.83 |
TraesCS3B01G323800.1 | Wheat | nucleus | 40.15 | 36.51 |
TraesCS3D01G289000.1 | Wheat | nucleus | 36.66 | 35.34 |
Zm00001d010812_P001 | Maize | nucleus | 38.15 | 34.08 |
Bra013358.1-P | Field mustard | nucleus | 43.89 | 34.04 |
CDX78902 | Canola | nucleus | 43.89 | 34.04 |
Os05t0530400-01 | Rice | nucleus | 38.15 | 33.33 |
TraesCS1A01G350400.2 | Wheat | nucleus | 36.66 | 33.18 |
HORVU1Hr1G081300.1 | Barley | nucleus | 35.66 | 33.18 |
EES18551 | Sorghum | nucleus | 37.41 | 31.51 |
Zm00001d038746_P001 | Maize | nucleus | 35.16 | 30.06 |
Solyc09g082670.2.1 | Tomato | nucleus | 25.44 | 28.65 |
Solyc12g098520.1.1 | Tomato | nucleus | 33.67 | 28.24 |
Solyc09g065660.2.1 | Tomato | nucleus | 25.69 | 27.69 |
Solyc07g040680.2.1 | Tomato | nucleus | 23.94 | 26.97 |
Solyc03g097120.2.1 | Tomato | nucleus | 30.67 | 25.05 |
Solyc08g076590.2.1 | Tomato | nucleus | 30.42 | 24.9 |
Solyc06g072750.2.1 | Tomato | nucleus | 29.43 | 24.48 |
Solyc12g007070.1.1 | Tomato | nucleus | 22.19 | 24.12 |
Solyc08g005170.2.1 | Tomato | nucleus | 31.42 | 23.91 |
Solyc09g009100.2.1 | Tomato | nucleus | 23.94 | 18.86 |
Protein Annotations
Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | UniProt:K4BE23 | PFAM:PF00447 |
PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF154 | SMART:SM00415 | SUPFAM:SSF46785 |
EnsemblPlantsGene:Solyc03g006000.2 | EnsemblPlants:Solyc03g006000.2.1 | UniParc:UPI0001ED05A1 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : |
Description
No Description!
Coordinates
chr3:+:678142..679948
Molecular Weight (calculated)
46082.8 Da
IEP (calculated)
5.220
GRAVY (calculated)
-0.798
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEAPCSVNA LPPFIAKIYE MVDDPSTDPI VSWSLNNKSF IVRNPPDFAR DLLPRYFKHN NFSSFIRQLN TYGFKKIDPE QWEFANEDFL RGQPHLLKNI
101: YRRKPVHSHS VQNIHSLSSS ALTESERQGY KEDIEKLKHE NESLHLVLHR HKQDHQGLEM QMQVLNQRVQ QVKDRQKNVL STLARTINKP GLALSLMPQL
201: EMNERKRRLP GNSFLYNEIG LEDNQASSSE NTTRENMDHT SLSTLNKEVL DQLESSLTFW EYTLRDIDQT RMRRSSSIDL DESISCADSP AISYPQLTVD
301: VGSKVSDIDM NSEPNGNTTP DVTPPENRVE TASHNVPTGV NDVFWEQFLT ENPGSTDVKP EREDMESKIS ESKTVEDGKF WWNRKTVISL TEQLGHLTPA
401: E
101: YRRKPVHSHS VQNIHSLSSS ALTESERQGY KEDIEKLKHE NESLHLVLHR HKQDHQGLEM QMQVLNQRVQ QVKDRQKNVL STLARTINKP GLALSLMPQL
201: EMNERKRRLP GNSFLYNEIG LEDNQASSSE NTTRENMDHT SLSTLNKEVL DQLESSLTFW EYTLRDIDQT RMRRSSSIDL DESISCADSP AISYPQLTVD
301: VGSKVSDIDM NSEPNGNTTP DVTPPENRVE TASHNVPTGV NDVFWEQFLT ENPGSTDVKP EREDMESKIS ESKTVEDGKF WWNRKTVISL TEQLGHLTPA
401: E
001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
Arabidopsis Description
HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.