Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012571.1-P | Field mustard | nucleus | 99.49 | 99.49 |
| CDY01562 | Canola | nucleus | 96.15 | 95.42 |
| CDY09259 | Canola | nucleus | 78.97 | 85.08 |
| CDX76506 | Canola | nucleus | 79.74 | 84.97 |
| AT4G18880.1 | Thale cress | nucleus | 82.82 | 80.55 |
| CDX99415 | Canola | nucleus | 78.72 | 79.95 |
| CDY13041 | Canola | nucleus | 51.03 | 64.82 |
| CDY23108 | Canola | nucleus | 53.33 | 61.18 |
| CDX78902 | Canola | nucleus | 76.41 | 57.64 |
| KRH11063 | Soybean | nucleus | 54.36 | 54.08 |
| KRH21206 | Soybean | nucleus | 54.36 | 54.08 |
| VIT_10s0003g01770.t01 | Wine grape | nucleus | 47.18 | 53.03 |
| KRH42919 | Soybean | nucleus | 54.62 | 52.99 |
| KRH59030 | Soybean | nucleus | 53.85 | 52.24 |
| GSMUA_Achr8P27750_001 | Banana | nucleus | 26.92 | 47.51 |
| Solyc02g072000.2.1 | Tomato | nucleus | 49.49 | 47.3 |
| Solyc03g006000.2.1 | Tomato | nucleus | 47.44 | 46.13 |
| PGSC0003DMT400071487 | Potato | nucleus | 47.44 | 45.91 |
| EES01479 | Sorghum | nucleus | 41.79 | 37.56 |
| Os01t0749300-02 | Rice | nucleus | 42.31 | 37.5 |
| TraesCS3A01G289200.1 | Wheat | nucleus | 41.28 | 37.27 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 41.28 | 37.27 |
| Zm00001d012749_P001 | Maize | nucleus | 41.03 | 36.95 |
| TraesCS3B01G323800.1 | Wheat | nucleus | 41.28 | 36.51 |
| CDX90626 | Canola | nucleus | 24.36 | 35.32 |
| CDY29054 | Canola | nucleus | 23.85 | 35.09 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 38.72 | 35.03 |
| GSMUA_Achr3P15640_001 | Banana | nucleus | 40.51 | 34.88 |
| TraesCS3D01G289000.1 | Wheat | nucleus | 37.18 | 34.86 |
| GSMUA_Achr6P31750_001 | Banana | nucleus | 43.08 | 34.57 |
| TraesCS1A01G350400.2 | Wheat | nucleus | 38.72 | 34.09 |
| Zm00001d010812_P001 | Maize | nucleus | 38.72 | 33.63 |
| CDX95313 | Canola | nucleus | 23.08 | 33.58 |
| CDX90627 | Canola | nucleus | 24.36 | 33.1 |
| EES18551 | Sorghum | nucleus | 39.74 | 32.56 |
| Os05t0530400-01 | Rice | nucleus | 38.21 | 32.46 |
| Zm00001d038746_P001 | Maize | nucleus | 38.21 | 31.77 |
| CDY43158 | Canola | nucleus | 24.87 | 31.7 |
| CDX94887 | Canola | nucleus | 21.79 | 31.48 |
| CDY14893 | Canola | nucleus | 20.77 | 30.92 |
| CDY11470 | Canola | nucleus | 22.56 | 30.88 |
| CDX76693 | Canola | nucleus | 22.05 | 30.18 |
| CDX94884 | Canola | nucleus | 21.54 | 29.27 |
| CDY10311 | Canola | nucleus | 28.46 | 28.61 |
| CDY10674 | Canola | nucleus | 28.21 | 28.28 |
| CDY34229 | Canola | nucleus | 27.44 | 28.23 |
| CDY46606 | Canola | nucleus | 27.18 | 27.68 |
| CDY46607 | Canola | nucleus | 26.15 | 27.49 |
| CDX85486 | Canola | nucleus | 31.03 | 27.38 |
| CDY21503 | Canola | nucleus | 24.36 | 27.22 |
| CDX78797 | Canola | nucleus | 30.0 | 27.21 |
| CDX92958 | Canola | nucleus | 23.85 | 27.03 |
| CDX74228 | Canola | nucleus | 31.03 | 26.59 |
| CDX92026 | Canola | nucleus | 30.51 | 26.56 |
| CDY60785 | Canola | nucleus | 29.74 | 26.54 |
| CDY12723 | Canola | nucleus | 32.31 | 26.53 |
| CDY01180 | Canola | nucleus | 32.31 | 26.42 |
| CDY28731 | Canola | nucleus | 29.49 | 26.38 |
| CDY38085 | Canola | nucleus | 29.49 | 26.2 |
| CDY58547 | Canola | nucleus | 30.26 | 25.99 |
| CDY16977 | Canola | nucleus | 29.23 | 25.85 |
| CDX93024 | Canola | nucleus | 20.26 | 25.82 |
| CDX83217 | Canola | nucleus | 24.62 | 25.74 |
| CDY50608 | Canola | nucleus | 20.26 | 25.08 |
| CDX77420 | Canola | nucleus | 20.0 | 24.84 |
| CDY39545 | Canola | nucleus | 19.74 | 24.52 |
| CDX70290 | Canola | nucleus | 22.56 | 24.24 |
| CDX69418 | Canola | nucleus | 30.26 | 24.23 |
| CDX93842 | Canola | nucleus | 27.95 | 22.38 |
| CDY10361 | Canola | nucleus | 22.82 | 22.19 |
| CDY01288 | Canola | nucleus | 27.69 | 21.95 |
| CDY43157 | Canola | cytosol | 4.1 | 17.78 |
| CDY44649 | Canola | nucleus | 19.23 | 15.79 |
| CDX84097 | Canola | nucleus | 3.33 | 4.83 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078JQH5 | UniProt:A0A078JQH5 | EnsemblPlants:CDY69818 | ProteinID:CDY69818 |
| ProteinID:CDY69818.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00092794001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF154 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EE833F | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaAnng31620DBnaAnng31620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQH5]
Coordinates
chrLK040429:+:731..2756
Molecular Weight (calculated)
44963.4 Da
IEP (calculated)
5.244
GRAVY (calculated)
-0.912
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESSHGGSS STSLPPFLTK TYEMVDDSSS DSIVSWSQSN KSFIVWNPPE FSRDLLPKFF KHNNFSSFIR QLNTYGFRKA DPEQWEFAND DFVRGQPHLM
101: KNIHRRKPVH SHSLPNLQPH PLTDSERQRM NDKIERLTKE KQVLLEELHK HEEERELFEQ QVKKLKDQLH HMEKRQRTMV SSVSQVLEKP ELALNLSPCL
201: PEANERKRRF PRVVGLETML EENHQTCGAV REEGSTSTSS HDATEHQVER LESSIAIWEN LVSDSCESME QQETRNMMTL DVDESSTCPE SPPLSCIQLS
301: IDIRLKSPPS PRTIDMNSEP DVSKELNTVS PTPPAVGAND VFWQQLLTEN PGSTEQREVQ SEKAEERSEK YWWNSRNVNT ITEQLGHLTS
101: KNIHRRKPVH SHSLPNLQPH PLTDSERQRM NDKIERLTKE KQVLLEELHK HEEERELFEQ QVKKLKDQLH HMEKRQRTMV SSVSQVLEKP ELALNLSPCL
201: PEANERKRRF PRVVGLETML EENHQTCGAV REEGSTSTSS HDATEHQVER LESSIAIWEN LVSDSCESME QQETRNMMTL DVDESSTCPE SPPLSCIQLS
301: IDIRLKSPPS PRTIDMNSEP DVSKELNTVS PTPPAVGAND VFWQQLLTEN PGSTEQREVQ SEKAEERSEK YWWNSRNVNT ITEQLGHLTS
001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
Arabidopsis Description
HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.