Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13041 | Canola | nucleus | 88.24 | 97.72 |
| Bra017595.1-P | Field mustard | nucleus | 97.65 | 97.65 |
| AT5G45710.3 | Thale cress | nucleus | 77.94 | 76.81 |
| CDY09259 | Canola | nucleus | 59.12 | 55.52 |
| CDX76506 | Canola | nucleus | 58.24 | 54.1 |
| CDY69818 | Canola | nucleus | 61.18 | 53.33 |
| CDY01562 | Canola | nucleus | 61.47 | 53.18 |
| CDX99415 | Canola | nucleus | 59.12 | 52.34 |
| VIT_10s0003g01770.t01 | Wine grape | nucleus | 52.06 | 51.01 |
| KRH42919 | Soybean | nucleus | 58.24 | 49.25 |
| KRH59030 | Soybean | nucleus | 58.24 | 49.25 |
| KRH21206 | Soybean | nucleus | 55.88 | 48.47 |
| KRH11063 | Soybean | nucleus | 55.59 | 48.21 |
| GSMUA_Achr8P27750_001 | Banana | nucleus | 28.82 | 44.34 |
| Solyc02g072000.2.1 | Tomato | nucleus | 51.47 | 42.89 |
| Solyc03g006000.2.1 | Tomato | nucleus | 49.12 | 41.65 |
| PGSC0003DMT400071487 | Potato | nucleus | 49.12 | 41.44 |
| CDX78902 | Canola | nucleus | 58.82 | 38.68 |
| Os01t0749300-02 | Rice | nucleus | 47.35 | 36.59 |
| EES01479 | Sorghum | nucleus | 45.88 | 35.94 |
| TraesCS3A01G289200.1 | Wheat | nucleus | 45.0 | 35.42 |
| Zm00001d012749_P001 | Maize | nucleus | 44.71 | 35.1 |
| TraesCS3B01G323800.1 | Wheat | nucleus | 45.29 | 34.92 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 44.12 | 34.72 |
| GSMUA_Achr6P31750_001 | Banana | nucleus | 49.12 | 34.36 |
| GSMUA_Achr3P15640_001 | Banana | nucleus | 45.0 | 33.77 |
| TraesCS3D01G289000.1 | Wheat | nucleus | 40.59 | 33.17 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 39.71 | 31.32 |
| CDX90626 | Canola | nucleus | 24.71 | 31.23 |
| Zm00001d010812_P001 | Maize | nucleus | 41.18 | 31.18 |
| CDY29054 | Canola | nucleus | 24.12 | 30.94 |
| CDX90627 | Canola | nucleus | 25.88 | 30.66 |
| CDX95313 | Canola | nucleus | 24.12 | 30.6 |
| Os05t0530400-01 | Rice | nucleus | 40.88 | 30.28 |
| CDY43158 | Canola | nucleus | 27.06 | 30.07 |
| TraesCS1A01G350400.2 | Wheat | nucleus | 39.12 | 30.02 |
| CDY14893 | Canola | nucleus | 22.65 | 29.39 |
| EES18551 | Sorghum | nucleus | 40.59 | 28.99 |
| CDX94887 | Canola | nucleus | 22.94 | 28.89 |
| CDY11470 | Canola | nucleus | 23.24 | 27.72 |
| Zm00001d038746_P001 | Maize | nucleus | 38.24 | 27.72 |
| CDY21503 | Canola | nucleus | 27.94 | 27.22 |
| CDX76693 | Canola | nucleus | 22.65 | 27.02 |
| CDX94884 | Canola | nucleus | 22.65 | 26.83 |
| CDX78797 | Canola | nucleus | 33.24 | 26.28 |
| CDX85486 | Canola | nucleus | 33.82 | 26.02 |
| CDY10674 | Canola | nucleus | 29.41 | 25.71 |
| CDY12723 | Canola | nucleus | 35.88 | 25.68 |
| CDY60785 | Canola | nucleus | 32.94 | 25.63 |
| CDY34229 | Canola | nucleus | 28.53 | 25.59 |
| CDY38085 | Canola | nucleus | 32.94 | 25.51 |
| CDX83217 | Canola | nucleus | 27.94 | 25.47 |
| CDY10311 | Canola | nucleus | 28.82 | 25.26 |
| CDX93024 | Canola | nucleus | 22.35 | 24.84 |
| CDY46607 | Canola | nucleus | 27.06 | 24.8 |
| CDY50608 | Canola | nucleus | 22.94 | 24.76 |
| CDY01180 | Canola | nucleus | 34.71 | 24.74 |
| CDX92958 | Canola | nucleus | 25.0 | 24.71 |
| CDY46606 | Canola | nucleus | 27.35 | 24.28 |
| CDX70290 | Canola | nucleus | 25.88 | 24.24 |
| CDY39545 | Canola | nucleus | 22.35 | 24.2 |
| CDX92026 | Canola | nucleus | 31.76 | 24.11 |
| CDY28731 | Canola | nucleus | 30.88 | 24.08 |
| CDY16977 | Canola | nucleus | 31.18 | 24.04 |
| CDX74228 | Canola | nucleus | 32.06 | 23.96 |
| CDX77420 | Canola | nucleus | 22.06 | 23.89 |
| CDY58547 | Canola | nucleus | 31.47 | 23.57 |
| CDX69418 | Canola | nucleus | 33.53 | 23.41 |
| CDX93842 | Canola | nucleus | 31.47 | 21.97 |
| CDY10361 | Canola | nucleus | 25.88 | 21.95 |
| CDY01288 | Canola | nucleus | 31.18 | 21.54 |
| CDY44649 | Canola | nucleus | 22.94 | 16.42 |
| CDY43157 | Canola | cytosol | 4.12 | 15.56 |
| CDX84097 | Canola | nucleus | 2.94 | 3.72 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078GES2 | UniProt:A0A078GES2 | EnsemblPlants:CDY23108 | ProteinID:CDY23108 |
| ProteinID:CDY23108.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00021594001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF154 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EB1F5E |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
BnaC09g18620DBnaC09g18620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GES2]
Coordinates
chrLK032140:-:79314..81124
Molecular Weight (calculated)
39055.7 Da
IEP (calculated)
5.710
GRAVY (calculated)
-0.837
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENNGVSTS LPPFLTKTYE MVDDSSSDSI ISWSDHNKSF IVKSPAEFSK DLLPRFFKHK NFSSFIRQLN TYGFRKVDPE KWEFANEDFV RGQPYLMKNI
101: HRRKPVHSHS LQNLQAQSPL SESERQSMKD QIERLKRDKE VLLTDLQNQE LERKGFELQV TALKDRLQHM EQRQRSIVTF VSQVLEKPGF SLNLETHETR
201: KRKLQETETS LPPGRSHADQ VEKLESSLTF LENLVTESCD KGMDIDVNES TSCAESLSNG DNRAKSTKID MNAEPVTVAV AAPKTGVNDV FWEQCLTENP
301: GSIEQQEVQS ERRDVDANKI GDGRTFWWKA KNVNDIAERA
101: HRRKPVHSHS LQNLQAQSPL SESERQSMKD QIERLKRDKE VLLTDLQNQE LERKGFELQV TALKDRLQHM EQRQRSIVTF VSQVLEKPGF SLNLETHETR
201: KRKLQETETS LPPGRSHADQ VEKLESSLTF LENLVTESCD KGMDIDVNES TSCAESLSNG DNRAKSTKID MNAEPVTVAV AAPKTGVNDV FWEQCLTENP
301: GSIEQQEVQS ERRDVDANKI GDGRTFWWKA KNVNDIAERA
001: MDENNGGSSS LPPFLTKTYE MVDDSSSDSV VAWSENNKSF IVKNPAEFSR DLLPRFFKHK NFSSFIRQLN TYGFRKVDPE KWEFLNDDFV RGRPYLMKNI
101: HRRKPVHSHS LVNLQAQNPL TESERRSMED QIERLKNEKE GLLAELQNQE QERKEFELQV TTLKDRLQHM EQHQKSIVAY VSQVLGKPGL SLNLENHERR
201: KRRFQENSLP PSSSHIEQVE KLESSLTFWE NLVSESCEKS GLQSSSMDHD AAESSLSIGD TRPKSSKIDM NSEPPVTVTA PAPKTGVNDD FWEQCLTENP
301: GSTEQQEVQS ERRDVGNDNN GNKIGNQRTY WWNSGNVNNI TEKAS
101: HRRKPVHSHS LVNLQAQNPL TESERRSMED QIERLKNEKE GLLAELQNQE QERKEFELQV TTLKDRLQHM EQHQKSIVAY VSQVLGKPGL SLNLENHERR
201: KRRFQENSLP PSSSHIEQVE KLESSLTFWE NLVSESCEKS GLQSSSMDHD AAESSLSIGD TRPKSSKIDM NSEPPVTVTA PAPKTGVNDD FWEQCLTENP
301: GSTEQQEVQS ERRDVGNDNN GNKIGNQRTY WWNSGNVNNI TEKAS
Arabidopsis Description
HSFA4CRHA1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.