Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90626 | Canola | nucleus | 84.33 | 84.01 |
| CDY29054 | Canola | nucleus | 82.09 | 83.02 |
| AT3G51910.1 | Thale cress | nucleus | 81.34 | 80.15 |
| CDX90627 | Canola | nucleus | 84.7 | 79.09 |
| CDY11470 | Canola | nucleus | 58.96 | 55.44 |
| CDX76693 | Canola | nucleus | 58.58 | 55.09 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 58.21 | 43.21 |
| KRG95588 | Soybean | nucleus | 58.96 | 42.7 |
| PGSC0003DMT400049793 | Potato | nucleus | 56.72 | 41.76 |
| PGSC0003DMT400049795 | Potato | nucleus | 55.97 | 41.67 |
| KRH32059 | Soybean | nucleus | 52.99 | 41.64 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 44.78 | 41.38 |
| Solyc09g065660.2.1 | Tomato | nucleus | 57.09 | 41.13 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 52.61 | 40.99 |
| KRH67266 | Soybean | nucleus | 58.96 | 40.93 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 51.87 | 40.76 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 51.49 | 40.47 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 51.49 | 40.47 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 46.27 | 40.26 |
| Zm00001d032923_P002 | Maize | nucleus | 53.36 | 40.06 |
| Os10t0419300-00 | Rice | nucleus | 53.36 | 39.94 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 49.25 | 39.52 |
| EER94213 | Sorghum | nucleus | 53.36 | 39.5 |
| Os03t0161900-02 | Rice | nucleus | 53.73 | 37.99 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 51.87 | 37.37 |
| EER95463 | Sorghum | nucleus | 54.48 | 37.34 |
| Zm00001d027757_P001 | Maize | nucleus | 53.36 | 37.24 |
| CDX94887 | Canola | nucleus | 36.94 | 36.67 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 48.88 | 36.59 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 47.01 | 36.42 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 50.0 | 36.41 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 49.25 | 36.26 |
| CDY10674 | Canola | nucleus | 52.24 | 35.99 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 46.64 | 35.92 |
| CDY34229 | Canola | nucleus | 50.75 | 35.88 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 47.01 | 35.69 |
| EER93298 | Sorghum | nucleus | 45.15 | 35.69 |
| CDY14893 | Canola | nucleus | 34.7 | 35.5 |
| EER95940 | Sorghum | nucleus | 49.25 | 35.48 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 44.03 | 35.44 |
| CDY46607 | Canola | nucleus | 48.88 | 35.31 |
| CDY10311 | Canola | nucleus | 50.75 | 35.05 |
| Zm00001d018941_P001 | Maize | nucleus | 48.88 | 34.93 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 48.13 | 34.77 |
| CDY46606 | Canola | nucleus | 49.63 | 34.73 |
| Os07t0178600-01 | Rice | nucleus | 48.13 | 34.68 |
| CDY21503 | Canola | nucleus | 44.4 | 34.1 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 47.01 | 33.87 |
| Zm00001d033987_P001 | Maize | nucleus | 46.64 | 33.69 |
| EER90889 | Sorghum | nucleus | 46.64 | 33.69 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 47.39 | 33.69 |
| CDX94884 | Canola | nucleus | 35.82 | 33.45 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 49.63 | 32.84 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 49.63 | 32.28 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 49.63 | 32.2 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 49.63 | 31.82 |
| CDX83217 | Canola | nucleus | 43.66 | 31.37 |
| CDY43158 | Canola | nucleus | 35.45 | 31.05 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 45.52 | 30.73 |
| CDX92958 | Canola | nucleus | 38.06 | 29.65 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 45.15 | 27.94 |
| CDY13041 | Canola | nucleus | 30.6 | 26.71 |
| CDX78797 | Canola | nucleus | 41.79 | 26.05 |
| CDY60785 | Canola | nucleus | 41.79 | 25.63 |
| CDX70290 | Canola | nucleus | 33.96 | 25.07 |
| CDX77420 | Canola | nucleus | 28.73 | 24.52 |
| CDX93024 | Canola | nucleus | 27.99 | 24.51 |
| CDY50608 | Canola | nucleus | 28.73 | 24.44 |
| CDY09259 | Canola | nucleus | 32.84 | 24.31 |
| CDY39545 | Canola | nucleus | 28.36 | 24.2 |
| CDY23108 | Canola | nucleus | 30.6 | 24.12 |
| CDX76506 | Canola | nucleus | 32.84 | 24.04 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 46.64 | 23.99 |
| CDX85486 | Canola | nucleus | 39.55 | 23.98 |
| CDY38085 | Canola | nucleus | 39.18 | 23.92 |
| CDY58547 | Canola | nucleus | 40.3 | 23.79 |
| CDX99415 | Canola | nucleus | 33.96 | 23.7 |
| CDY10361 | Canola | nucleus | 35.07 | 23.44 |
| CDX92026 | Canola | nucleus | 39.18 | 23.44 |
| CDY16977 | Canola | nucleus | 38.43 | 23.36 |
| CDY28731 | Canola | nucleus | 37.69 | 23.17 |
| CDY69818 | Canola | nucleus | 33.58 | 23.08 |
| CDX74228 | Canola | nucleus | 39.18 | 23.08 |
| CDY01562 | Canola | nucleus | 33.58 | 22.9 |
| CDX93842 | Canola | nucleus | 41.04 | 22.59 |
| CDY01288 | Canola | nucleus | 41.04 | 22.36 |
| CDX69418 | Canola | nucleus | 39.55 | 21.77 |
| CDY44649 | Canola | nucleus | 35.07 | 19.79 |
| CDY12723 | Canola | nucleus | 34.7 | 19.58 |
| Zm00001d034433_P003 | Maize | nucleus | 45.15 | 19.48 |
| CDY01180 | Canola | nucleus | 34.33 | 19.29 |
| CDX78902 | Canola | nucleus | 32.84 | 17.02 |
| CDX84097 | Canola | nucleus | 6.72 | 6.69 |
| CDY43157 | Canola | cytosol | 1.87 | 5.56 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078E7G0 | EnsemblPlants:CDX95313 | ProteinID:CDX95313 | ProteinID:CDX95313.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00100979001 |
| InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | PANTHER:PTHR10015 |
| PANTHER:PTHR10015:SF260 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EDBA3F | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
Description
BnaC04g28450D
Coordinates
chrLK031888:+:172080..173707
Molecular Weight (calculated)
31169.1 Da
IEP (calculated)
6.188
GRAVY (calculated)
-0.715
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPFQLQEGD PPPSPPKPVE GLHEVGPPPF LIKTFEIVED PNTDHIVSWN RGGASFVVWD LHSFSTFLLP RHFKHSNFSS FIRQLKTYGF RKIESDRWEF
101: ANDGFLLGQR QLLKSIKRRA SFGSSPSTHD PCTELRREKQ LLMMELVCLR QQQQTTRSYI KAMEQRIEGA ERKQRQMMSF LARAMRSPSF LHQLLKQRDM
201: RLKELEDEAA ERERGSSMSE LEALALEMQG YGKERNVKEE EDMVVERELD DGFWEELLSN ESLASTSS
101: ANDGFLLGQR QLLKSIKRRA SFGSSPSTHD PCTELRREKQ LLMMELVCLR QQQQTTRSYI KAMEQRIEGA ERKQRQMMSF LARAMRSPSF LHQLLKQRDM
201: RLKELEDEAA ERERGSSMSE LEALALEMQG YGKERNVKEE EDMVVERELD DGFWEELLSN ESLASTSS
001: MMNPFLPEGC DPPPPPQPME GLHENAPPPF LTKTFEMVDD PNTDHIVSWN RGGTSFVVWD LHSFSTILLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
Arabidopsis Description
HSFA7AHeat stress transcription factor A-7a [Source:UniProtKB/Swiss-Prot;Acc:Q9SV12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.