Factsheet for TraesCS5A01G383800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G393200.1	Wheat	nucleus	95.16	93.9
HORVU5Hr1G094380.1	Barley	nucleus	91.13	91.37
EER90889	Sorghum	nucleus	64.78	64.96
Zm00001d033987_P001	Maize	nucleus	63.44	63.61
Solyc06g053960.2.1	Tomato	nucleus	20.97	54.93
GSMUA_Achr8P20520_001	Banana	nucleus	39.52	50.69
GSMUA_Achr5P03000_001	Banana	nucleus	44.35	49.4
CDX95313	Canola	nucleus	33.87	47.01
TraesCS1A01G375600.2	Wheat	nucleus	46.51	47.01
AT3G51910.1	Thale cress	nucleus	34.14	46.69
Bra012829.1-P	Field mustard	nucleus	30.91	46.37
TraesCS5A01G437900.1	Wheat	nucleus	41.67	44.8
KRH31657	Soybean	nucleus	40.05	44.21
Bra012828.1-P	Field mustard	nucleus	31.72	43.87
CDX90626	Canola	nucleus	31.72	43.87
CDY29054	Canola	nucleus	31.18	43.77
KRG91367	Soybean	nucleus	42.74	43.44
TraesCS4A01G027700.1	Wheat	nucleus	39.78	43.4
VIT_00s0179g00150.t01	Wine grape	nucleus	41.4	42.66
CDX90627	Canola	nucleus	32.26	41.81
KRG95588	Soybean	nucleus	40.86	41.08
TraesCS3A01G405200.1	Wheat	nucleus	43.01	40.3
TraesCS2A01G089300.1	Wheat	nucleus	44.62	40.19
KRH32059	Soybean	nucleus	36.83	40.18
CDX94887	Canola	nucleus	29.03	40.0
KRH67266	Soybean	nucleus	41.4	39.9
KRH35452	Soybean	nucleus	39.25	39.89
Solyc09g082670.2.1	Tomato	nucleus	38.17	39.89
VIT_05s0020g04090.t01	Wine grape	nucleus	37.63	39.77
Solyc09g065660.2.1	Tomato	nucleus	38.98	38.98
PGSC0003DMT400016511	Potato	nucleus	37.9	38.95
CDY14893	Canola	nucleus	27.42	38.93
AT5G43840.1	Thale cress	nucleus	29.3	38.65
AT3G63350.1	Thale cress	nucleus	29.3	38.65
CDY10674	Canola	nucleus	40.32	38.56
CDY34229	Canola	nucleus	39.25	38.52
PGSC0003DMT400049793	Potato	nucleus	37.63	38.46
Bra035993.1-P	Field mustard	nucleus	29.03	38.43
PGSC0003DMT400049795	Potato	nucleus	37.1	38.33
CDX76693	Canola	nucleus	28.76	37.54
Bra007739.1-P	Field mustard	nucleus	28.76	37.54
CDY11470	Canola	nucleus	28.76	37.54
CDY46607	Canola	nucleus	37.37	37.47
CDY10311	Canola	nucleus	38.71	37.11
Bra033913.1-P	Field mustard	nucleus	40.59	37.1
CDY46606	Canola	nucleus	38.17	37.08
Bra001885.1-P	Field mustard	nucleus	38.71	36.83
Bra023800.1-P	Field mustard	nucleus	39.25	36.68
PGSC0003DMT400041944	Potato	nucleus	33.87	36.63
TraesCS3A01G280800.1	Wheat	nucleus	23.12	36.44
CDX94884	Canola	nucleus	27.96	36.24
AT3G22830.1	Thale cress	nucleus	39.52	36.21
CDX92958	Canola	nucleus	31.99	34.59
TraesCS5A01G550700.1	Wheat	nucleus	24.46	33.33
TraesCS5A01G548700.1	Wheat	nucleus	24.19	32.85
TraesCS7A01G360400.1	Wheat	nucleus	30.91	32.12
TraesCS3A01G393100.1	Wheat	nucleus	23.66	31.21
TraesCS7A01G355300.1	Wheat	nucleus	22.31	31.2
TraesCS3A01G393200.1	Wheat	nucleus	25.54	30.25
TraesCS3A01G229000.1	Wheat	nucleus	25.81	29.54
TraesCS4A01G062800.1	Wheat	nucleus	29.57	28.72
TraesCS5A01G524000.1	Wheat	nucleus	20.16	28.63
TraesCS4A01G322300.1	Wheat	nucleus	38.17	27.26
TraesCS6A01G098800.1	Wheat	nucleus	29.57	24.02
TraesCS1A01G350400.2	Wheat	nucleus	27.15	22.8
TraesCS2A01G204500.1	Wheat	nucleus	29.3	21.84
TraesCS3A01G289200.1	Wheat	nucleus	25.0	21.53

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056
ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF186	SMART:SM00415	SUPFAM:SSF46785	EnsemblPlantsGene:TraesCS5A01G383800
EnsemblPlants:TraesCS5A01G383800.1	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:-:581487008..581488298

Molecular Weight (calculated)

41131.0 Da

IEP (calculated)

5.212

GRAVY (calculated)

-0.678

Length

372 amino acids

Sequence
(BLAST)

001: MDPFHGIVKE EEFDFAGGAA DGYSPSSWGS SPSSWGSSPS SWAGDGALAE LPRPMDGLGE ACPTPFLNKT YEVVDDHSTD TIVSWGVAGN TFVVWDAHAF
101: SMVLLPRYFK HSNFSSFVRQ LNTYGFRKVD PDRWEFAAEG FLRGQKELLK TIRRRRPQSS PAGTPALLQQ GQQQGACLEV GHFGPEGKVQ RLQRDKGTLI
201: AEVVKLRQEQ QATRAQMQEM EARLAATEQK QQQMTVFLAR AMKSPSFLQM LVERQDQSRR KELAEALLSK KRGRPIEYLL PRNGESSYGA PARGYGPGLA
301: DGGEGRRADG EDTESFWKEL LSLGLEERHR EAGGGGGGEA SGAEVDDDVD DEVDELVQSL YHLSPNRPRS YQ

Best Arabidopsis Sequence Match ( AT2G26150.1 )
(BLAST)

001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP

Arabidopsis Description

HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.