Factsheet for GSMUA_Achr8P20520_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03000_001	Banana	nucleus	70.34	61.08
GSMUA_Achr6P24430_001	Banana	nucleus	64.48	60.71
Solyc06g053960.2.1	Tomato	nucleus	28.62	58.45
GSMUA_Achr1P27200_001	Banana	nucleus	63.79	55.56
GSMUA_Achr3P06020_001	Banana	nucleus	27.24	51.97
VIT_00s0179g00150.t01	Wine grape	nucleus	58.28	46.81
KRH31657	Soybean	nucleus	53.1	45.7
KRG91367	Soybean	nucleus	57.24	45.36
AT3G51910.1	Thale cress	nucleus	42.41	45.22
CDX95313	Canola	nucleus	41.38	44.78
Bra012829.1-P	Field mustard	nucleus	38.28	44.76
KRG95588	Soybean	nucleus	55.52	43.51
CDX90626	Canola	nucleus	40.0	43.12
Bra012828.1-P	Field mustard	nucleus	40.0	43.12
Solyc09g082670.2.1	Tomato	nucleus	52.76	42.98
CDX94887	Canola	nucleus	40.0	42.96
KRH32059	Soybean	nucleus	50.34	42.82
CDY29054	Canola	nucleus	38.97	42.64
KRH35452	Soybean	nucleus	53.79	42.62
GSMUA_Achr6P00960_001	Banana	nucleus	45.86	42.49
VIT_05s0020g04090.t01	Wine grape	nucleus	51.38	42.33
KRH67266	Soybean	nucleus	56.21	42.23
Solyc09g065660.2.1	Tomato	nucleus	54.14	42.2
CDX90627	Canola	nucleus	41.38	41.81
GSMUA_Achr2P16660_001	Banana	nucleus	39.31	41.76
PGSC0003DMT400016511	Potato	nucleus	52.07	41.71
PGSC0003DMT400049793	Potato	nucleus	51.72	41.21
CDY34229	Canola	nucleus	53.45	40.9
CDY10674	Canola	nucleus	54.83	40.87
CDY46607	Canola	nucleus	52.07	40.7
PGSC0003DMT400049795	Potato	nucleus	50.34	40.56
CDX94884	Canola	nucleus	40.0	40.42
HORVU5Hr1G094380.1	Barley	nucleus	51.03	39.89
AT3G63350.1	Thale cress	nucleus	38.62	39.72
CDY10311	Canola	nucleus	53.1	39.69
CDY46606	Canola	nucleus	52.41	39.69
TraesCS5D01G393200.1	Wheat	nucleus	51.38	39.52
TraesCS5A01G383800.1	Wheat	nucleus	50.69	39.52
EER90889	Sorghum	nucleus	50.34	39.35
Zm00001d033987_P001	Maize	nucleus	50.0	39.08
Bra033913.1-P	Field mustard	nucleus	54.83	39.07
Bra023800.1-P	Field mustard	nucleus	53.45	38.94
Bra007739.1-P	Field mustard	nucleus	37.93	38.6
CDY11470	Canola	nucleus	37.93	38.6
AT3G22830.1	Thale cress	nucleus	53.45	38.18
GSMUA_Achr8P27750_001	Banana	nucleus	28.97	38.01
CDX76693	Canola	nucleus	37.24	37.89
Bra001885.1-P	Field mustard	nucleus	51.03	37.85
CDY14893	Canola	nucleus	34.14	37.79
PGSC0003DMT400041944	Potato	nucleus	44.48	37.5
AT5G43840.1	Thale cress	nucleus	36.21	37.23
Bra035993.1-P	Field mustard	nucleus	35.86	37.01
CDX92958	Canola	nucleus	43.45	36.63
GSMUA_Achr2P21640_001	Banana	nucleus	41.03	35.84
GSMUA_Achr4P30990_001	Banana	nucleus	33.79	33.91
GSMUA_Achr7P24790_001	Banana	nucleus	23.79	33.01
GSMUA_Achr3P15740_001	Banana	nucleus	31.03	32.61
GSMUA_Achr3P27600_001	Banana	nucleus	45.17	30.75
GSMUA_Achr9P01640_001	Banana	nucleus	38.97	29.66
GSMUA_Achr10P...	Banana	nucleus	31.03	29.51
GSMUA_Achr4P04500_001	Banana	nucleus	44.48	29.39
GSMUA_Achr8P28330_001	Banana	nucleus	31.72	28.13
GSMUA_Achr3P31860_001	Banana	nucleus	31.03	27.78
GSMUA_Achr6P27750_001	Banana	nucleus	36.55	26.97
GSMUA_Achr4P17040_001	Banana	nucleus	44.83	26.69
GSMUA_Achr3P15640_001	Banana	nucleus	40.69	26.05
GSMUA_Achr8P27820_001	Banana	nucleus	31.72	25.34
GSMUA_Achr6P31750_001	Banana	nucleus	39.31	23.46
GSMUA_Achr5P15900_001	Banana	nucleus	35.86	19.01

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr8G20520_001	EnsemblPlants:GSMUA_Achr8P20520_001	EnsemblPlants:GSMUA_Achr8T20520_001	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:M0TS55	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF139	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI00029672CA	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

Heat stress transcription factor A-2b [Source:GMGC_GENE;Acc:GSMUA_Achr8G20520_001]

Coordinates

chr8:+:25701424..25704747

Molecular Weight (calculated)

33620.3 Da

IEP (calculated)

5.030

GRAVY (calculated)

-0.894

Length

290 amino acids

Sequence
(BLAST)

001: MNPVKEEYQD YSEVSSGSNE IVVDPPRPLE GLHEAGPPPF LTKTYDMVDD PSTNQVVSWS QTNNSFVVWD PHAFAMTLLP KYFKHNNFSS FVRQLNTYGF
101: RKMDPDRWEF ANEGFLRGQK HLLKTIKRRR PHNHPSLQQS LSAYIEEVVK LRQEQQNTRA HLKAMEERLQ LTEQRQQQTM AFLARLMQNP SLLQQLLDQK
201: ERMKELEEAI SKKRRRPIDT APEPDDFHSE EHLAPHENNT DGELNDNFWE ELLNEGLGDE KGTFGIEGVD TEDVNVLADQ LGFLTSTSPK

Best Arabidopsis Sequence Match ( AT3G22830.1 )
(BLAST)

001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN

Arabidopsis Description

HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.