Factsheet for GSMUA_Achr6P27750_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P01640_001	Banana	nucleus	64.63	66.67
GSMUA_Achr8P28330_001	Banana	nucleus	54.96	66.06
GSMUA_Achr3P06020_001	Banana	nucleus	18.83	48.68
TraesCS6B01G127000.1	Wheat	nucleus	54.96	47.47
Os02t0496100-01	Rice	nucleus	56.74	46.95
TraesCS6A01G098800.1	Wheat	nucleus	54.71	46.94
TraesCS6D01G083800.1	Wheat	nucleus	54.45	46.72
HORVU6Hr1G017910.1	Barley	nucleus	53.69	46.17
EES05094	Sorghum	nucleus	55.98	45.36
GSMUA_Achr8P27750_001	Banana	nucleus	24.68	43.89
KRH58845	Soybean	nucleus	52.16	42.8
KRH42748	Soybean	nucleus	51.15	42.14
AT4G13980.1	Thale cress	nucleus	49.11	41.42
PGSC0003DMT400011871	Potato	nucleus	49.36	40.59
Solyc12g098520.1.1	Tomato	nucleus	49.36	40.59
Zm00001d016520_P001	Maize	nucleus	54.45	40.53
CDY12723	Canola	nucleus	48.35	40.0
Bra032752.1-P	Field mustard	nucleus	47.33	38.99
CDY01180	Canola	nucleus	47.33	38.99
VIT_05s0029g00350.t01	Wine grape	mitochondrion, nucleus	41.73	37.27
GSMUA_Achr8P20520_001	Banana	nucleus	26.97	36.55
GSMUA_Achr2P16660_001	Banana	nucleus	24.17	34.8
GSMUA_Achr5P03000_001	Banana	nucleus	28.24	33.23
GSMUA_Achr6P24430_001	Banana	nucleus	25.95	33.12
GSMUA_Achr6P00960_001	Banana	nucleus	25.45	31.95
GSMUA_Achr7P24790_001	Banana	nucleus	16.79	31.58
GSMUA_Achr3P15640_001	Banana	nucleus	36.13	31.35
GSMUA_Achr4P04500_001	Banana	nucleus	34.86	31.21
GSMUA_Achr1P27200_001	Banana	nucleus	25.7	30.33
GSMUA_Achr2P21640_001	Banana	nucleus	25.45	30.12
GSMUA_Achr3P15740_001	Banana	nucleus	21.12	30.07
GSMUA_Achr3P27600_001	Banana	nucleus	31.55	29.11
GSMUA_Achr4P30990_001	Banana	nucleus	21.37	29.07
GSMUA_Achr6P31750_001	Banana	nucleus	35.62	28.81
GSMUA_Achr4P17040_001	Banana	nucleus	32.32	26.08
GSMUA_Achr8P27820_001	Banana	nucleus	22.9	24.79
GSMUA_Achr3P31860_001	Banana	nucleus	20.36	24.69
GSMUA_Achr10P...	Banana	nucleus	18.83	24.26
GSMUA_Achr5P15900_001	Banana	nucleus	24.94	17.92

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr6G27750_001	EnsemblPlants:GSMUA_Achr6P27750_001	EnsemblPlants:GSMUA_Achr6T27750_001	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:M0TAS0	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF157	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000296000C	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

Heat stress transcription factor A-5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G27750_001]

Coordinates

chr6:-:28159817..28165177

Molecular Weight (calculated)

43984.4 Da

IEP (calculated)

4.886

GRAVY (calculated)

-0.720

Length

393 amino acids

Sequence
(BLAST)

001: MDGGGGGGPA RFLLKTYDMV DDASTDDIVS WSSTNASFVV WNPPDFAARL LPTYFKHNNF SSFIRQLNTY GFRKIDSERW EFANEDFVKG QKRLLANIRR
101: RKPIHSHSHP PGGGLADSER AVLEEEIDRL NKEKAGLKDS LLKFEQQQSG TEIQIEDLKR RLADMEQRQL KMVAFVQRAL QNPQLMENLV KMAAASSVDF
201: SYIHKKRRLP LDVDYCQETS ENSFCDDHSS TTKPENGRML DLDFCDKLKL ELCSAIPDDN LVMVRTQSSN EDNGSSQPKQ TGCGQEPMEC PPLVHETLQL
301: FGNDRSTIGD SADAKAVSSW EASPTCNEAP AIPTGGVNDV FWQQFLTERP GSSDTKEASS CLRPNPCNEQ GEETMEGSRN GGISKKDMEQ LKL

Best Arabidopsis Sequence Match ( AT4G13980.1 )
(BLAST)

001: MNGALGNSSA SVSGGEGAGG PAPFLVKTYE MVDDSSTDQI VSWSANNNSF IVWNHAEFSR LLLPTYFKHN NFSSFIRQLN TYGFRKIDPE RWEFLNDDFI
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL

Arabidopsis Description

HSFA5Heat stress transcription factor A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q94BZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.