Factsheet for GSMUA_Achr3P06020_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P27750_001	Banana	nucleus	47.37	32.58
GSMUA_Achr7P24790_001	Banana	nucleus	43.42	31.58
GSMUA_Achr8P20520_001	Banana	nucleus	51.97	27.24
GSMUA_Achr6P24430_001	Banana	nucleus	52.63	25.97
GSMUA_Achr6P00960_001	Banana	nucleus	49.34	23.96
GSMUA_Achr1P27200_001	Banana	nucleus	51.97	23.72
GSMUA_Achr5P03000_001	Banana	nucleus	51.97	23.65
GSMUA_Achr4P30990_001	Banana	nucleus	44.74	23.53
GSMUA_Achr2P16660_001	Banana	nucleus	41.45	23.08
GSMUA_Achr2P21640_001	Banana	nucleus	49.34	22.59
GSMUA_Achr3P27600_001	Banana	nucleus	63.16	22.54
GSMUA_Achr4P04500_001	Banana	nucleus	63.16	21.87
GSMUA_Achr3P15740_001	Banana	nucleus	39.47	21.74
GSMUA_Achr4P17040_001	Banana	nucleus	65.13	20.33
GSMUA_Achr9P01640_001	Banana	nucleus	50.66	20.21
GSMUA_Achr8P28330_001	Banana	nucleus	41.45	19.27
GSMUA_Achr3P31860_001	Banana	nucleus	40.79	19.14
GSMUA_Achr6P27750_001	Banana	nucleus	48.68	18.83
GSMUA_Achr10P...	Banana	nucleus	36.84	18.36
GSMUA_Achr3P15640_001	Banana	nucleus	51.32	17.22
GSMUA_Achr8P27820_001	Banana	nucleus	38.82	16.25
GSMUA_Achr6P31750_001	Banana	nucleus	50.0	15.64
GSMUA_Achr5P15900_001	Banana	nucleus	49.34	13.71

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
EnsemblPlantsGene:GSMUA_Achr3G06020_001	EnsemblPlants:GSMUA_Achr3P06020_001	EnsemblPlants:GSMUA_Achr3T06020_001	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388
UniProt:M0SC70	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF162
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000294E696	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G06020_001]

Coordinates

chr3:+:4057382..4058867

Molecular Weight (calculated)

16695.7 Da

IEP (calculated)

10.514

GRAVY (calculated)

-0.558

Length

152 amino acids

Sequence
(BLAST)

001: MEKCGGDGEA VAATAGAIPG MNGSAPPPFL SKTYDMVDDL ATDAIVSWGA GNNSFVVWNT PDFARHLLPK YFKHSNFSSF VRQLNTYGFK KVDPDRWEFA
101: NEGFLRGQKQ LLKTINRRKP FWVGGRHRGA KKRQECTQAG ARQAAATAAS RG

Best Arabidopsis Sequence Match ( AT1G32330.1 )
(BLAST)

001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP

Arabidopsis Description

HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.