Factsheet for GSMUA_Achr5P15900_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P06020_001	Banana	nucleus	13.71	49.34
Bra009515.1-P	Field mustard	nucleus	26.51	39.94
CDX70290	Canola	nucleus	26.51	39.94
KRH20029	Soybean	nucleus	32.36	38.99
KRH32651	Soybean	nucleus	32.36	38.48
CDY10361	Canola	nucleus	28.15	38.4
AT5G03720.1	Thale cress	nucleus	27.97	37.14
GSMUA_Achr8P27750_001	Banana	nucleus	14.81	36.65
PGSC0003DMT400006917	Potato	nucleus	32.91	36.22
Solyc09g009100.2.1	Tomato	nucleus	33.64	36.15
GSMUA_Achr8P20520_001	Banana	nucleus	19.01	35.86
KRH67848	Soybean	nucleus	27.61	35.7
VIT_08s0007g03900.t01	Wine grape	nucleus	33.82	34.84
GSMUA_Achr5P03000_001	Banana	nucleus	21.21	34.73
GSMUA_Achr6P00960_001	Banana	nucleus	19.38	33.87
GSMUA_Achr2P16660_001	Banana	nucleus	16.82	33.7
GSMUA_Achr6P24430_001	Banana	nucleus	18.83	33.44
GSMUA_Achr4P04500_001	Banana	nucleus	25.78	32.12
GSMUA_Achr1P27200_001	Banana	nucleus	19.01	31.23
GSMUA_Achr4P30990_001	Banana	nucleus	16.45	31.14
GSMUA_Achr3P27600_001	Banana	nucleus	22.49	28.87
GSMUA_Achr3P15740_001	Banana	nucleus	14.08	27.9
GSMUA_Achr4P17040_001	Banana	nucleus	24.31	27.31
GSMUA_Achr9P01640_001	Banana	nucleus	18.65	26.77
GSMUA_Achr8P28330_001	Banana	nucleus	15.54	25.99
GSMUA_Achr10P...	Banana	nucleus	14.44	25.9
GSMUA_Achr7P24790_001	Banana	nucleus	9.87	25.84
GSMUA_Achr2P21640_001	Banana	nucleus	15.54	25.6
GSMUA_Achr3P31860_001	Banana	nucleus	14.81	25.0
GSMUA_Achr6P27750_001	Banana	nucleus	17.92	24.94
GSMUA_Achr3P15640_001	Banana	nucleus	19.56	23.62
GSMUA_Achr6P31750_001	Banana	nucleus	20.66	23.25
GSMUA_Achr8P27820_001	Banana	nucleus	14.26	21.49

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr5G15900_001	EnsemblPlants:GSMUA_Achr5P15900_001	EnsemblPlants:GSMUA_Achr5T15900_001	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:M0SYW9	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF164	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0002959562	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

Putative Heat stress transcription factor A-3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G15900_001]

Coordinates

chr5:+:12441425..12447734

Molecular Weight (calculated)

60126.6 Da

IEP (calculated)

4.484

GRAVY (calculated)

-0.418

Length

547 amino acids

Sequence
(BLAST)

001: MDFGGRSASN SSQSPRLRPK MEPPGEPSRL SPPSPSVSPL PDSAAAAPSA LQPDGGGGGG EGVPRPLEAL QSSPIPPFLS KTYELVDDPA LDAVLSWAPA
101: GRSFVVWDPV EFARVVLPRH FKHNNFSSFV RQLNTYGFHK IDADRWEFAN EDFLQGNRVL LKNINRRRSS QVHQIAMQVS LSAEPENSGL EGEIHMLKSD
201: RSALMQEIMR LQQEHLITVK QMDMLKLQMQ SAEQRQKQMV SFLAKVIRNP VFLVHLRQQQ EQSGIASPRV IRKFLKQKPS SNTDAIGSID QGAKNMLGFE
301: VVAASTLQDP EHVVNKEIPD ILPDFVEKLG LHASGEELIE GLDEAEVDAL APLFLDAATV SSMAKNPESH QSQIQLSITP AECFSSFSQG VETERTSFSA
401: TVPPSESMTQ DLVSLVLRGK NTVSYTLDAT YGASEDLISF PEDASEEKMR DKGPARDITI DQEEVWEAVT EAGQQSFGCE GNVWEDFVHD PSVLGFAAGL
501: DVPWDPVLHV LDGNLEFDKW DNAGLCLQES GDQSASLKND NPENMQQ

Best Arabidopsis Sequence Match ( AT5G03720.1 )
(BLAST)

001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP

Arabidopsis Description

HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.