CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20029	Soybean	nucleus	88.91	90.09
KRH67848	Soybean	nucleus	53.26	57.92
Bra009515.1-P	Field mustard	nucleus	40.87	51.79
CDX70290	Canola	nucleus	40.87	51.79
CDY10361	Canola	nucleus	41.74	47.88
AT5G03720.1	Thale cress	nucleus	41.09	45.87
VIT_08s0007g03900.t01	Wine grape	nucleus	50.65	43.88
PGSC0003DMT400006917	Potato	nucleus	47.39	43.86
Solyc09g009100.2.1	Tomato	nucleus	48.48	43.81
KRH32059	Soybean	nucleus	25.65	34.6
KRH31657	Soybean	nucleus	24.57	33.53
KRG91367	Soybean	nucleus	26.3	33.06
GSMUA_Achr5P15900_001	Banana	nucleus	38.48	32.36
KRH35452	Soybean	nucleus	25.22	31.69
KRG95588	Soybean	nucleus	25.43	31.62
KRH05436	Soybean	nucleus	23.91	30.99
KRH61515	Soybean	nucleus	24.78	30.65
KRH67266	Soybean	nucleus	25.0	29.79
KRH15573	Soybean	nucleus	23.04	29.12
KRH39283	Soybean	nucleus	19.35	27.81
KRH19208	Soybean	nucleus	24.13	27.21
KRH74387	Soybean	nucleus	28.7	26.94
KRH07474	Soybean	nucleus	29.78	26.86
KRH21206	Soybean	nucleus	22.83	26.79
KRH02689	Soybean	nucleus	23.48	26.73
KRH59030	Soybean	nucleus	23.26	26.62
KRH77766	Soybean	nucleus	26.74	26.51
KRH39566	Soybean	nucleus	28.7	26.4
KRH11063	Soybean	nucleus	22.39	26.28
KRH27709	Soybean	nucleus	26.3	26.08
KRH42919	Soybean	nucleus	22.61	25.87
KRH58845	Soybean	nucleus	23.7	22.76
KRH42748	Soybean	nucleus	22.83	22.01

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100807323	MapMan:15.5.13	EMBL:ACUP02006146	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G066100
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:K7LHS6	EnsemblPlants:KRH32651	ProteinID:KRH32651	ProteinID:KRH32651.1	PFAM:PF00447
PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF164	SMART:SM00415	SUPFAM:SSF46785
UniParc:UPI0002961EA0	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:6399365..6402557

Molecular Weight (calculated)

51463.3 Da

IEP (calculated)

4.818

GRAVY (calculated)

-0.584

Length

460 amino acids

Sequence
(BLAST)

001: MNPNDGNNSP SPKPLEMVNP VPPFLSKTFD LVDAPTLDPI ISWNSTGLSF VVWDPLEFAR IVLPRHFKHN NFSSFVRQLN TYGFRKIDTD KWEFFNEAFQ
101: RGKKHLLKNI QRRRSSQSQP VGSYIGIGSS TEAGGSEVEI EIERLRKEKT MLMEEVVDLQ QEQRRTAHHA GEVNLRLQSA EQRQKQMVSF LAKLIQNPAF
201: LARLRHKKEQ KEIDSPRVVR KFVKQHHETG TTTTAETLQE GQIVRYQPDW RNIAMSSETP KLSSVSIEQS PHYLSQGLAG EMSVVGAEDL TAQIDNIVSD
301: DLAAVHGITP SQEMMIGEGS STFGAEDPLF KGKSVMSPIL EVPPEYFPSF PEGLTKEKKD FQDFSALGTE GMIKLEDIWD SGLNVSGAAL SSGNELWGNH
401: VNYEEFPQFG VTSGMSDSDI WDIGLGSFGI DTWPTDEPSL GETDGQSGQP NEDRSKNFDP

Best Arabidopsis Sequence Match ( AT5G03720.1 )
(BLAST)

001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP

Arabidopsis Description

HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.