CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19208	Soybean	nucleus	90.1	89.22
AT5G54070.1	Thale cress	nucleus	33.66	41.09
KRH05436	Soybean	nucleus	33.17	37.75
KRH15573	Soybean	nucleus	32.67	36.26
Solyc07g040680.2.1	Tomato	nucleus	31.44	35.67
PGSC0003DMT400082752	Potato	nucleus	30.94	34.63
KRH31657	Soybean	nucleus	28.71	34.42
KRH61515	Soybean	nucleus	31.68	34.41
KRG91367	Soybean	nucleus	30.94	34.15
KRH32059	Soybean	nucleus	28.71	34.02
KRH35452	Soybean	nucleus	29.95	33.06
KRG95588	Soybean	nucleus	29.7	32.43
KRH67266	Soybean	nucleus	29.46	30.83
KRH39283	Soybean	nucleus	21.29	26.88
KRH67848	Soybean	nucleus	26.98	25.77
KRH11063	Soybean	nucleus	24.75	25.51
KRH21206	Soybean	nucleus	24.75	25.51
KRH07474	Soybean	nucleus	30.94	24.51
KRH59030	Soybean	nucleus	24.26	24.38
KRH42919	Soybean	nucleus	24.01	24.13
KRH20029	Soybean	nucleus	26.98	24.01
KRH74387	Soybean	nucleus	28.96	23.88
KRH32651	Soybean	nucleus	26.73	23.48
KRH39566	Soybean	nucleus	28.71	23.2
KRH27709	Soybean	nucleus	26.24	22.84
KRH77766	Soybean	nucleus	25.99	22.63
KRH42748	Soybean	nucleus	25.5	21.59
KRH58845	Soybean	nucleus	25.5	21.5

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100778060	MapMan:15.5.13	EMBL:ACUP02010313	ncoils:Coil	EnsemblPlantsGene:GLYMA_17G053700
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:K7MK25	EnsemblPlants:KRH02689	ProteinID:KRH02689	ProteinID:KRH02689.1	PFAM:PF00447
PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF217	SMART:SM00415	SUPFAM:SSF46785
UniParc:UPI000233F35F	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:-:4087893..4090442

Molecular Weight (calculated)

46388.6 Da

IEP (calculated)

6.726

GRAVY (calculated)

-0.832

Length

404 amino acids

Sequence
(BLAST)

001: MGGEEVARVK AELFDDNESD RNDDDVLSES KDSGVTTAHA VKEEMDDGAA NWSSSSSTSP KPMEGLHEVG PPPFLKKTFE MVEDPHTNPI VSWSQTRHSF
101: VVWDSHEFSK TLLPKYFKHS NFSSFVRQLN TYGFRKVDSD RWEFANEGFQ GGKKHLLKNI RRRSKCNKLH QGAFNMMKPD VDSEVEKLKK DQNILKVEIL
201: KLRQQQENSH VQLTNVQERI RCAEMKQFQM MYFLTRMARR PAFVEQLVHK IRRKREIDGN DMVKRPRLMG NPCHVPFPKT METTPNFDYR HQQGHKQFAT
301: LQSELNVTEV NSSRMEHPTP SPLEDELGNS LQGLRAHGCS RARAQDASSS AYHVMSEKLM RENSIVDEEL DVNDSNIYLE LEDLITKPTD WSVGSASGLV
401: EQTS

Best Arabidopsis Sequence Match ( AT5G54070.1 )
(BLAST)

001: MTAIPNVVDI ESSSSSLCQE TATETVTVER GSSDSSSKPD DVVLLIKEEE DDAVNLSLGF WKLHEIGLIT PFLRKTFEIV DDKVTDPVVS WSPTRKSFII
101: WDSYEFSENL LPKYFKHKNF SSFIRQLNSY GFKKVDSDRW EFANEGFQGG KKHLLKNIKR RSKNTKCCNK EASTTTTETE VESLKEEQSP MRLEMLKLKQ
201: QQEESQHQMV TVQEKIHGVD TEQQHMLSFF AKLAKDQRFV ERLVKKRKMK IQRELEAAEF VKKLKLLQDQ ETQKNLLDVE REFMAMAATE HNPEPDILVN
301: NQSGNTRCQL NSEDLLVDGG SMDVNGRIEI E

Arabidopsis Description

HSFA9Heat stress transcription factor A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVW2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.