CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20029	Soybean	nucleus	58.16	54.19
KRH32651	Soybean	nucleus	57.92	53.26
Bra009515.1-P	Field mustard	nucleus	41.61	48.48
CDX70290	Canola	nucleus	41.61	48.48
CDY10361	Canola	nucleus	42.55	44.89
AT5G03720.1	Thale cress	nucleus	42.55	43.69
VIT_08s0007g03900.t01	Wine grape	nucleus	48.94	38.98
PGSC0003DMT400006917	Potato	nucleus	44.68	38.03
Solyc09g009100.2.1	Tomato	nucleus	44.44	36.94
KRH32059	Soybean	nucleus	27.19	33.72
KRG95588	Soybean	nucleus	26.95	30.81
KRH31657	Soybean	nucleus	24.11	30.27
KRH05436	Soybean	nucleus	25.06	29.86
KRG91367	Soybean	nucleus	25.77	29.78
KRH35452	Soybean	nucleus	25.3	29.23
KRH15573	Soybean	nucleus	24.82	28.85
KRH67266	Soybean	nucleus	26.24	28.76
KRH61515	Soybean	nucleus	24.82	28.23
KRH19208	Soybean	nucleus	26.71	27.7
GSMUA_Achr5P15900_001	Banana	nucleus	35.7	27.61
KRH02689	Soybean	nucleus	25.77	26.98
KRH07474	Soybean	nucleus	31.68	26.27
KRH39283	Soybean	nucleus	19.39	25.62
KRH21206	Soybean	nucleus	23.17	25.0
KRH11063	Soybean	nucleus	22.93	24.74
KRH59030	Soybean	nucleus	23.4	24.63
KRH77766	Soybean	nucleus	26.95	24.57
KRH42919	Soybean	nucleus	23.17	24.38
KRH74387	Soybean	nucleus	28.13	24.29
KRH39566	Soybean	nucleus	28.13	23.8
KRH27709	Soybean	nucleus	25.77	23.49
KRH42748	Soybean	nucleus	25.06	22.22
KRH58845	Soybean	nucleus	25.06	22.13

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100788429	MapMan:15.5.13	EMBL:ACUP02002084	ncoils:Coil	EnsemblPlantsGene:GLYMA_03G191100
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0043565
InterPro:HSF_DNA-bd	InterPro:HSF_fam	UniProt:I1JPX4	InterPro:IPR036388	EnsemblPlants:KRH67848	ProteinID:KRH67848
ProteinID:KRH67848.1	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF164
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI00023C1C6F	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:40192761..40195259

Molecular Weight (calculated)

48270.7 Da

IEP (calculated)

5.542

GRAVY (calculated)

-0.611

Length

423 amino acids

Sequence
(BLAST)

001: MNSSPSSSQL PSSSADFDKF NSLPRFRPLE CLQGNPVPAF LSKTFELVDD PSLDPIISWG STGVSFVVWD PTLFARHVLP RNFKHNNFSS FVRQLNTYGF
101: RKIDTEKWEF FNEAFQRGKR HLLKNIRRRG PPQSHQVGGN IVPYSDADKA GLEFELESLR KERSVLMQEV VELQQQQRTT LQRARQVNQR LQSAELIQKQ
201: MVSFLARLFE KPAFLTSLQH AKEQRDLGCP KVRRRFIKQH QGQTEISDFL NEGQIVRYQP DWRNVTTSSE IQEMYPVSLE ESPNYLSQAL AKEFSEGTEN
301: LISDEVMSIA DTMGFKSSSF GLDGNLFKGK NVMSSNEGLL AEEFVSFPED LTKETGFPEF SPLGTEGIIK REDKRNTNFD VSGADSSSGN EQWGNPINYE
401: VPEFVVTSGM TDMWDINYLT HSK

Best Arabidopsis Sequence Match ( AT5G03720.1 )
(BLAST)

001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP

Arabidopsis Description

HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.