CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59030	Soybean	nucleus	94.53	94.53
KRH11063	Soybean	nucleus	67.41	69.13
KRH21206	Soybean	nucleus	67.16	68.88
VIT_10s0003g01770.t01	Wine grape	nucleus	51.99	60.23
CDY13041	Canola	nucleus	45.52	59.61
Bra017595.1-P	Field mustard	nucleus	49.25	58.24
CDY23108	Canola	nucleus	49.25	58.24
AT5G45710.3	Thale cress	nucleus	49.75	57.97
CDY09259	Canola	nucleus	50.25	55.8
Bra012571.1-P	Field mustard	nucleus	53.48	55.13
CDX76506	Canola	nucleus	49.75	54.64
CDY69818	Canola	nucleus	52.99	54.62
CDY01562	Canola	nucleus	53.23	54.45
Bra020988.1-P	Field mustard	nucleus	46.77	53.87
AT4G18880.1	Thale cress	nucleus	53.73	53.87
Solyc02g072000.2.1	Tomato	nucleus	54.48	53.68
CDX99415	Canola	nucleus	51.24	53.65
Solyc03g006000.2.1	Tomato	nucleus	53.23	53.37
PGSC0003DMT400071487	Potato	nucleus	52.74	52.61
GSMUA_Achr8P27750_001	Banana	nucleus	26.37	47.96
Os01t0749300-02	Rice	nucleus	43.53	39.77
Zm00001d012749_P001	Maize	nucleus	42.79	39.72
EES01479	Sorghum	nucleus	42.54	39.4
GSMUA_Achr3P15640_001	Banana	nucleus	43.28	38.41
Bra013358.1-P	Field mustard	nucleus	49.01	38.1
CDX78902	Canola	nucleus	49.01	38.1
HORVU3Hr1G071550.3	Barley	nucleus	40.3	37.5
TraesCS3A01G289200.1	Wheat	nucleus	40.3	37.5
GSMUA_Achr6P31750_001	Banana	nucleus	44.78	37.04
TraesCS3B01G323800.1	Wheat	nucleus	40.55	36.96
TraesCS3D01G289000.1	Wheat	nucleus	38.06	36.78
HORVU1Hr1G081300.1	Barley	nucleus	39.3	36.66
Zm00001d010812_P001	Maize	nucleus	40.05	35.86
Os05t0530400-01	Rice	nucleus	39.55	34.64
TraesCS1A01G350400.2	Wheat	nucleus	38.06	34.54
EES18551	Sorghum	nucleus	40.3	34.03
Zm00001d038746_P001	Maize	nucleus	37.81	32.41
KRH32059	Soybean	nucleus	25.87	30.5
KRH58845	Soybean	nucleus	36.07	30.27
KRH42748	Soybean	nucleus	35.57	29.98
KRH31657	Soybean	nucleus	25.12	29.97
KRH05436	Soybean	nucleus	26.12	29.58
KRH67266	Soybean	nucleus	28.11	29.27
KRG91367	Soybean	nucleus	26.62	29.23
KRH15573	Soybean	nucleus	26.37	29.12
KRG95588	Soybean	nucleus	26.62	28.92
KRH39283	Soybean	nucleus	22.64	28.44
KRH35452	Soybean	nucleus	25.62	28.14
KRH61515	Soybean	nucleus	24.88	26.88
KRH27709	Soybean	nucleus	28.86	25.0
KRH74387	Soybean	nucleus	30.35	24.9
KRH39566	Soybean	nucleus	30.85	24.8
KRH77766	Soybean	nucleus	28.61	24.78
KRH19208	Soybean	nucleus	24.88	24.51
KRH07474	Soybean	nucleus	30.85	24.31
KRH02689	Soybean	nucleus	24.13	24.01
KRH67848	Soybean	nucleus	24.38	23.17
KRH20029	Soybean	nucleus	25.87	22.91
KRH32651	Soybean	nucleus	25.87	22.61

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100817602	MapMan:15.5.13	EMBL:ACUP02004840	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G119900
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:K7L661	EnsemblPlants:KRH42919	ProteinID:KRH42919	ProteinID:KRH42919.1	ProteinID:KRH42920.1
ProteinID:KRH42921.1	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF154
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0001ED059E	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:9234318..9239370

Molecular Weight (calculated)

45955.4 Da

IEP (calculated)

4.856

GRAVY (calculated)

-0.776

Length

402 amino acids

Sequence
(BLAST)

001: MDDAQGSSNS LPPFLAKTYE MVDDPSTDSV VSWSVTSKSF IVWNPPEFAR DLLPRFFKHN NFSSFIRQLN TYGFKKVDPE QWEFANDDFV RGQPHLMKNI
101: HRRKPVHSHS LQNLQAQGPL GESERQSFTD EIEKLKHDKE QLLVELQKYQ HEWQAYEIQI HCSKDRLEKL EQNQQRMVSS VSHVLQKPVI SVNILPLTET
201: LDRKRRLPRS GHFYDEDGVE DAIETCQMLP RENADHTTVL TLNVERLDQL ESSMAFWEAI VHDIGDTFVQ IQSSMDLDES TSCADSPSLS CAQLDVEVRH
301: KSPGIDMNSE PTTAAVPEPV ASKEQPAGTT VAATGVNDVF WEQFLTEDPG ASETREVQSE RKDYEGRKNE GKPSDLNKFW WNKRNANNLP EQMGHVGQAE
401: KT

Best Arabidopsis Sequence Match ( AT4G18880.1 )
(BLAST)

001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S

Arabidopsis Description

HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.