Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18551 | Sorghum | nucleus | 85.08 | 80.25 |
| Zm00001d038746_P001 | Maize | nucleus | 78.62 | 75.27 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 57.68 | 60.09 |
| TraesCS1A01G350400.2 | Wheat | nucleus | 58.13 | 58.92 |
| Os05t0530400-01 | Rice | nucleus | 60.13 | 58.82 |
| GSMUA_Achr8P27750_001 | Banana | nucleus | 23.83 | 48.42 |
| CDY13041 | Canola | nucleus | 30.29 | 44.3 |
| VIT_10s0003g01770.t01 | Wine grape | nucleus | 33.85 | 43.8 |
| AT5G45710.3 | Thale cress | nucleus | 32.74 | 42.61 |
| VIT_12s0028g01410.t01 | Wine grape | nucleus | 34.3 | 41.73 |
| GSMUA_Achr3P15640_001 | Banana | nucleus | 41.87 | 41.5 |
| KRH11063 | Soybean | nucleus | 36.08 | 41.33 |
| Bra017595.1-P | Field mustard | nucleus | 31.18 | 41.18 |
| CDY23108 | Canola | nucleus | 31.18 | 41.18 |
| KRH21206 | Soybean | nucleus | 35.86 | 41.07 |
| CDY09259 | Canola | nucleus | 32.74 | 40.61 |
| KRH42919 | Soybean | nucleus | 35.86 | 40.05 |
| KRH59030 | Soybean | nucleus | 35.86 | 40.05 |
| CDX76506 | Canola | nucleus | 32.29 | 39.62 |
| CDX99415 | Canola | nucleus | 33.85 | 39.58 |
| Zm00001d012749_P001 | Maize | nucleus | 38.08 | 39.49 |
| Solyc07g055710.2.1 | Tomato | nucleus | 34.08 | 39.43 |
| CDY69818 | Canola | nucleus | 33.63 | 38.72 |
| Bra012571.1-P | Field mustard | nucleus | 33.63 | 38.72 |
| CDY01562 | Canola | nucleus | 33.85 | 38.68 |
| AT4G18880.1 | Thale cress | nucleus | 34.52 | 38.65 |
| Bra020988.1-P | Field mustard | nucleus | 29.84 | 38.4 |
| PGSC0003DMT400044683 | Potato | nucleus | 35.19 | 38.35 |
| Solyc03g006000.2.1 | Tomato | nucleus | 34.08 | 38.15 |
| Solyc02g072000.2.1 | Tomato | nucleus | 34.3 | 37.75 |
| PGSC0003DMT400071487 | Potato | nucleus | 33.85 | 37.72 |
| GSMUA_Achr6P31750_001 | Banana | nucleus | 39.64 | 36.63 |
| Zm00001d016255_P001 | Maize | nucleus | 18.04 | 31.52 |
| Zm00001d046299_P001 | Maize | nucleus | 18.71 | 31.46 |
| Zm00001d032923_P002 | Maize | nucleus | 24.05 | 30.25 |
| Zm00001d043536_P001 | Maize | nucleus | 16.04 | 28.92 |
| Zm00001d018941_P001 | Maize | nucleus | 23.39 | 28.0 |
| Zm00001d027757_P001 | Maize | nucleus | 23.39 | 27.34 |
| Zm00001d044168_P001 | Maize | nucleus | 20.04 | 27.19 |
| CDX78902 | Canola | nucleus | 31.18 | 27.08 |
| Bra013358.1-P | Field mustard | nucleus | 31.18 | 27.08 |
| Zm00001d016520_P001 | Maize | nucleus | 31.4 | 26.7 |
| Zm00001d033987_P001 | Maize | nucleus | 20.94 | 25.34 |
| Zm00001d034886_P001 | Maize | nucleus | 28.95 | 24.67 |
| Zm00001d046204_P001 | Maize | nucleus | 19.38 | 23.84 |
| Zm00001d011406_P001 | Maize | nucleus | 19.6 | 22.74 |
| Zm00001d012823_P001 | Maize | nucleus | 27.84 | 22.48 |
| Zm00001d016674_P001 | Maize | nucleus | 24.28 | 21.46 |
| Zm00001d048041_P004 | Maize | nucleus | 21.16 | 21.02 |
| Zm00001d044259_P001 | Maize | plastid | 16.7 | 19.89 |
| Zm00001d034433_P003 | Maize | nucleus | 24.05 | 17.39 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:103635873 | MapMan:15.5.13 | UniProt:A0A1D6FU61 | ProteinID:AQK95012.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF154 |
| SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004DEC220 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | EnsemblPlantsGene:Zm00001d010812 |
| EnsemblPlants:Zm00001d010812_P001 | EnsemblPlants:Zm00001d010812_T001 | SEG:seg | : | : | : |
Description
HSF-transcription factor 16Heat stress transcription factor A-4a
Coordinates
chr8:+:128602960..128604732
Molecular Weight (calculated)
49980.5 Da
IEP (calculated)
4.964
GRAVY (calculated)
-0.586
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMEGSNSS SQPPPFLIKT YEMVEDPATN HVVSWGPGGA SFVVWNPPDF SRDLLPKYFK HNNFSSFIRQ LNTYGFRKID PERWEFANDD FVRGHTHLLK
101: NIHRRKPVHS HSPQTQVNGP LAESERRELE DEISRLKYEK SLLLTDLQRQ SQQRCGISWQ MQSLERRLAQ MEERQRNIVA SLRDILLPVG HGVVSWGSAT
201: GADHFSKKRR VPKMDFFVDE PKVEEQQVPF LQTVGAETPG MSPIRLLSAE PFEKMELALV SLESFLQRAT AHTSAAQGML YAAGVAEPSP ALALGEMLSA
301: PMDTEIDLQP SACQNPFAST SGQDQSSSPL AEPPSYYAQS PMLPMAQLHE HAHRTAAGVD MNSDTTTGDT SQDDTTSETG GSHVPAKVND VFWERFLTDA
401: AEGKSEAIEA KEDVKTAVDR CCPRLQDNVD QITEQMGQLD SASYAPENY
101: NIHRRKPVHS HSPQTQVNGP LAESERRELE DEISRLKYEK SLLLTDLQRQ SQQRCGISWQ MQSLERRLAQ MEERQRNIVA SLRDILLPVG HGVVSWGSAT
201: GADHFSKKRR VPKMDFFVDE PKVEEQQVPF LQTVGAETPG MSPIRLLSAE PFEKMELALV SLESFLQRAT AHTSAAQGML YAAGVAEPSP ALALGEMLSA
301: PMDTEIDLQP SACQNPFAST SGQDQSSSPL AEPPSYYAQS PMLPMAQLHE HAHRTAAGVD MNSDTTTGDT SQDDTTSETG GSHVPAKVND VFWERFLTDA
401: AEGKSEAIEA KEDVKTAVDR CCPRLQDNVD QITEQMGQLD SASYAPENY
001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
Arabidopsis Description
HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.