Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P15640_001 | Banana | nucleus | 57.0 | 61.15 |
| GSMUA_Achr8P27750_001 | Banana | nucleus | 26.54 | 58.37 |
| VIT_12s0028g01410.t01 | Wine grape | nucleus | 39.09 | 51.49 |
| CDY13041 | Canola | nucleus | 32.1 | 50.81 |
| GSMUA_Achr3P06020_001 | Banana | nucleus | 15.64 | 50.0 |
| VIT_10s0003g01770.t01 | Wine grape | nucleus | 35.19 | 49.28 |
| CDY23108 | Canola | nucleus | 34.36 | 49.12 |
| Bra017595.1-P | Field mustard | nucleus | 34.16 | 48.82 |
| EES01479 | Sorghum | nucleus | 42.59 | 47.7 |
| AT5G45710.3 | Thale cress | nucleus | 33.74 | 47.54 |
| Os01t0749300-02 | Rice | nucleus | 43.0 | 47.5 |
| KRH21206 | Soybean | nucleus | 38.27 | 47.45 |
| TraesCS3A01G289200.1 | Wheat | nucleus | 41.56 | 46.76 |
| Zm00001d012749_P001 | Maize | nucleus | 41.56 | 46.65 |
| KRH11063 | Soybean | nucleus | 37.45 | 46.43 |
| CDX76506 | Canola | nucleus | 34.57 | 45.9 |
| CDY09259 | Canola | nucleus | 34.16 | 45.86 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 40.53 | 45.6 |
| KRH59030 | Soybean | nucleus | 37.65 | 45.52 |
| TraesCS3D01G289000.1 | Wheat | nucleus | 38.68 | 45.19 |
| TraesCS3B01G323800.1 | Wheat | nucleus | 40.95 | 45.12 |
| KRH42919 | Soybean | nucleus | 37.04 | 44.78 |
| Bra020988.1-P | Field mustard | nucleus | 32.1 | 44.7 |
| Solyc03g006000.2.1 | Tomato | nucleus | 36.83 | 44.64 |
| PGSC0003DMT400071487 | Potato | nucleus | 36.83 | 44.42 |
| Bra012571.1-P | Field mustard | nucleus | 34.77 | 43.33 |
| AT4G18880.1 | Thale cress | nucleus | 35.6 | 43.14 |
| CDY69818 | Canola | nucleus | 34.57 | 43.08 |
| Solyc07g055710.2.1 | Tomato | nucleus | 34.36 | 43.04 |
| CDY01562 | Canola | nucleus | 34.57 | 42.75 |
| CDX99415 | Canola | nucleus | 33.54 | 42.45 |
| Solyc02g072000.2.1 | Tomato | nucleus | 35.39 | 42.16 |
| PGSC0003DMT400044683 | Potato | nucleus | 34.77 | 41.02 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 35.6 | 40.14 |
| Zm00001d010812_P001 | Maize | nucleus | 36.63 | 39.64 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 23.46 | 39.31 |
| EES18551 | Sorghum | nucleus | 37.86 | 38.66 |
| Os05t0530400-01 | Rice | nucleus | 36.01 | 38.13 |
| Zm00001d038746_P001 | Maize | nucleus | 36.21 | 37.53 |
| TraesCS1A01G350400.2 | Wheat | nucleus | 34.16 | 37.47 |
| GSMUA_Achr9P01640_001 | Banana | nucleus | 29.01 | 37.01 |
| GSMUA_Achr8P28330_001 | Banana | nucleus | 24.69 | 36.7 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 24.9 | 36.23 |
| GSMUA_Achr6P27750_001 | Banana | nucleus | 28.81 | 35.62 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 22.22 | 35.06 |
| GSMUA_Achr2P16660_001 | Banana | nucleus | 19.55 | 34.8 |
| GSMUA_Achr7P24790_001 | Banana | nucleus | 14.81 | 34.45 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 30.04 | 33.26 |
| GSMUA_Achr6P00960_001 | Banana | nucleus | 21.4 | 33.23 |
| GSMUA_Achr2P21640_001 | Banana | nucleus | 22.22 | 32.53 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 22.22 | 32.43 |
| CDX78902 | Canola | nucleus | 33.33 | 31.33 |
| Bra013358.1-P | Field mustard | nucleus | 33.33 | 31.33 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 27.16 | 30.99 |
| GSMUA_Achr3P15740_001 | Banana | nucleus | 17.49 | 30.8 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 30.04 | 29.98 |
| GSMUA_Achr3P31860_001 | Banana | nucleus | 19.14 | 28.7 |
| GSMUA_Achr4P30990_001 | Banana | nucleus | 16.87 | 28.37 |
| GSMUA_Achr10P... | Banana | nucleus | 16.26 | 25.9 |
| GSMUA_Achr8P27820_001 | Banana | nucleus | 18.31 | 24.52 |
| GSMUA_Achr5P15900_001 | Banana | nucleus | 23.25 | 20.66 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr6G31750_001 | EnsemblPlants:GSMUA_Achr6P31750_001 | EnsemblPlants:GSMUA_Achr6T31750_001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | UniProt:M0TBX0 | PFAM:PF00447 | PRINTS:PR00056 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF154 |
| SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0002966CED | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
Putative Heat stress transcription factor A-4b [Source:GMGC_GENE;Acc:GSMUA_Achr6G31750_001]
Coordinates
chr6:+:31438111..31442524
Molecular Weight (calculated)
55086.8 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.604
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSRGSSNS PPPFLTKTYE MVDDPSTNSI VSWSPSNTSF VVWNPPEFAR DLLPKYFKHN NFSSFVRQLN TYGFRKTDPD QWEFTNDDFI RGQRHLLQNI
101: YRRKPVHSHS LHNQGNTSEA ERQELEEEIE RLKQKKGTLL SEFQKQTQQR HGMEHQMQSL EDRLQVLENR QRSLMDFLAQ IIQKPGFLSN IVQFSDLRSK
201: KRRLPKIDFL GEDAIMEDNQ IASFQPVARE KSDILPMYAL DMEPFEKMES SLNSLENFFK SVSQASGDDV CYDNIHSSPE VAESTSDAET SVIPATEIQT
301: DSQSKVSKID MNLAPAAIDI DSSRGQTTGT VAQTGANDVF WEQFLTEIPG SSETKEVQSK RRDLDDKQSQ GEMGERGNTW CDRKNYCLFC RVQGVLKSVF
401: VRGSPSVFGF SLGYRTRYSK GCSCLLLRSA IELFVSITRY SLQIRISPHC RSTASRSIMQ SSSLAGAREG TLLGLVLLIP NGHSAC
101: YRRKPVHSHS LHNQGNTSEA ERQELEEEIE RLKQKKGTLL SEFQKQTQQR HGMEHQMQSL EDRLQVLENR QRSLMDFLAQ IIQKPGFLSN IVQFSDLRSK
201: KRRLPKIDFL GEDAIMEDNQ IASFQPVARE KSDILPMYAL DMEPFEKMES SLNSLENFFK SVSQASGDDV CYDNIHSSPE VAESTSDAET SVIPATEIQT
301: DSQSKVSKID MNLAPAAIDI DSSRGQTTGT VAQTGANDVF WEQFLTEIPG SSETKEVQSK RRDLDDKQSQ GEMGERGNTW CDRKNYCLFC RVQGVLKSVF
401: VRGSPSVFGF SLGYRTRYSK GCSCLLLRSA IELFVSITRY SLQIRISPHC RSTASRSIMQ SSSLAGAREG TLLGLVLLIP NGHSAC
001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
Arabidopsis Description
HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.