Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P20520_001 | Banana | nucleus | 61.08 | 70.34 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 58.08 | 62.99 |
| Solyc06g053960.2.1 | Tomato | nucleus | 24.85 | 58.45 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 56.89 | 57.06 |
| GSMUA_Achr3P06020_001 | Banana | nucleus | 23.65 | 51.97 |
| CDX95313 | Canola | nucleus | 39.52 | 49.25 |
| Bra012829.1-P | Field mustard | nucleus | 36.23 | 48.79 |
| KRH31657 | Soybean | nucleus | 49.1 | 48.66 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 52.1 | 48.2 |
| Bra012828.1-P | Field mustard | nucleus | 38.02 | 47.21 |
| CDX90626 | Canola | nucleus | 38.02 | 47.21 |
| KRG91367 | Soybean | nucleus | 51.5 | 46.99 |
| AT3G51910.1 | Thale cress | nucleus | 38.02 | 46.69 |
| CDY29054 | Canola | nucleus | 36.83 | 46.42 |
| Solyc09g082670.2.1 | Tomato | nucleus | 49.1 | 46.07 |
| KRH35452 | Soybean | nucleus | 50.0 | 45.63 |
| PGSC0003DMT400016511 | Potato | nucleus | 48.8 | 45.03 |
| CDX90627 | Canola | nucleus | 38.32 | 44.6 |
| KRH32059 | Soybean | nucleus | 45.51 | 44.57 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 49.4 | 44.47 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 49.4 | 44.35 |
| KRG95588 | Soybean | nucleus | 48.8 | 44.05 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 46.41 | 44.03 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 49.4 | 43.77 |
| CDY10674 | Canola | nucleus | 50.9 | 43.7 |
| KRH67266 | Soybean | nucleus | 50.3 | 43.52 |
| CDX94887 | Canola | nucleus | 35.03 | 43.33 |
| CDY34229 | Canola | nucleus | 49.1 | 43.27 |
| PGSC0003DMT400049793 | Potato | nucleus | 47.01 | 43.13 |
| EER90889 | Sorghum | nucleus | 47.31 | 42.59 |
| PGSC0003DMT400049795 | Potato | nucleus | 45.81 | 42.5 |
| Solyc09g065660.2.1 | Tomato | nucleus | 47.31 | 42.47 |
| CDY14893 | Canola | nucleus | 33.23 | 42.37 |
| AT5G43840.1 | Thale cress | nucleus | 35.63 | 42.2 |
| CDY46606 | Canola | nucleus | 48.2 | 42.04 |
| CDY10311 | Canola | nucleus | 48.8 | 42.01 |
| Zm00001d033987_P001 | Maize | nucleus | 46.41 | 41.78 |
| Bra033913.1-P | Field mustard | nucleus | 50.9 | 41.77 |
| AT3G22830.1 | Thale cress | nucleus | 50.6 | 41.63 |
| GSMUA_Achr6P00960_001 | Banana | nucleus | 38.92 | 41.53 |
| CDY46607 | Canola | nucleus | 46.11 | 41.51 |
| Bra023800.1-P | Field mustard | nucleus | 49.1 | 41.21 |
| GSMUA_Achr8P27750_001 | Banana | nucleus | 27.25 | 41.18 |
| GSMUA_Achr2P16660_001 | Banana | nucleus | 33.53 | 41.03 |
| PGSC0003DMT400041944 | Potato | nucleus | 42.22 | 40.99 |
| Bra035993.1-P | Field mustard | nucleus | 34.43 | 40.93 |
| Bra001885.1-P | Field mustard | nucleus | 47.31 | 40.41 |
| CDX94884 | Canola | nucleus | 34.43 | 40.07 |
| AT3G63350.1 | Thale cress | nucleus | 32.93 | 39.01 |
| CDX92958 | Canola | nucleus | 39.52 | 38.37 |
| Bra007739.1-P | Field mustard | nucleus | 32.04 | 37.54 |
| CDY11470 | Canola | nucleus | 32.04 | 37.54 |
| CDX76693 | Canola | nucleus | 31.74 | 37.19 |
| GSMUA_Achr7P24790_001 | Banana | nucleus | 22.16 | 35.41 |
| GSMUA_Achr3P15740_001 | Banana | nucleus | 28.44 | 34.42 |
| GSMUA_Achr2P21640_001 | Banana | nucleus | 33.83 | 34.04 |
| GSMUA_Achr4P30990_001 | Banana | nucleus | 29.04 | 33.56 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 44.01 | 33.49 |
| GSMUA_Achr9P01640_001 | Banana | nucleus | 35.33 | 30.97 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 44.91 | 30.8 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 38.62 | 30.28 |
| GSMUA_Achr3P31860_001 | Banana | nucleus | 29.04 | 29.94 |
| GSMUA_Achr10P... | Banana | nucleus | 26.05 | 28.52 |
| GSMUA_Achr8P28330_001 | Banana | nucleus | 27.84 | 28.44 |
| GSMUA_Achr6P27750_001 | Banana | nucleus | 33.23 | 28.24 |
| GSMUA_Achr8P27820_001 | Banana | nucleus | 29.64 | 27.27 |
| GSMUA_Achr3P15640_001 | Banana | nucleus | 36.53 | 26.93 |
| GSMUA_Achr6P31750_001 | Banana | nucleus | 36.23 | 24.9 |
| GSMUA_Achr5P15900_001 | Banana | nucleus | 34.73 | 21.21 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr5G03000_001 | EnsemblPlants:GSMUA_Achr5P03000_001 | EnsemblPlants:GSMUA_Achr5T03000_001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | UniProt:M0SV79 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 |
| PANTHER:PTHR10015:SF139 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI000294FBD5 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
Heat stress transcription factor A-2b [Source:GMGC_GENE;Acc:GSMUA_Achr5G03000_001]
Coordinates
chr5:+:2057938..2059891
Molecular Weight (calculated)
38807.6 Da
IEP (calculated)
4.817
GRAVY (calculated)
-0.851
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNLNPVKE EHQEFSDASA SSTDVAMDPP KPLDGLHDVG PPPFLMKTYE IVDDPSTDQV VSWSPRNNSF VVWNPHAFAM TLLPRYFKHN NFSSFVRQLN
101: TYGFRKVDPD RWEFANEGFL RGQRHLLKTI KRRKQVAYPP LQQQPLSSFL EVGEFGLEGE INRLKRDKQL LLTELVKLRQ EQQNTRNHLK DMEEKVLATE
201: QRQQQMMTFL ARFMRNPSFL QQLVEQKERI KELEEAISKK RRRPIDRAPE NDDEVSSLGS LAREIQELVD ENNQEQFELQ DVKSDGELND EFWDDLLNEG
301: IDGEKGRFET ESGGNEVVNM LADKLGFLSS TNPR
101: TYGFRKVDPD RWEFANEGFL RGQRHLLKTI KRRKQVAYPP LQQQPLSSFL EVGEFGLEGE INRLKRDKQL LLTELVKLRQ EQQNTRNHLK DMEEKVLATE
201: QRQQQMMTFL ARFMRNPSFL QQLVEQKERI KELEEAISKK RRRPIDRAPE NDDEVSSLGS LAREIQELVD ENNQEQFELQ DVKSDGELND EFWDDLLNEG
301: IDGEKGRFET ESGGNEVVNM LADKLGFLSS TNPR
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.