Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10311 | Canola | nucleus | 95.89 | 96.13 |
| Bra033913.1-P | Field mustard | nucleus | 99.74 | 95.33 |
| CDX94887 | Canola | nucleus | 59.9 | 86.3 |
| CDY34229 | Canola | nucleus | 80.21 | 82.32 |
| CDY46606 | Canola | nucleus | 78.41 | 79.63 |
| AT3G22830.1 | Thale cress | nucleus | 82.52 | 79.06 |
| CDX94884 | Canola | nucleus | 57.84 | 78.4 |
| CDX92958 | Canola | nucleus | 68.38 | 77.33 |
| CDY46607 | Canola | nucleus | 72.24 | 75.74 |
| Solyc06g053960.2.1 | Tomato | nucleus | 24.68 | 67.61 |
| Solyc09g082670.2.1 | Tomato | nucleus | 50.9 | 55.62 |
| KRG91367 | Soybean | nucleus | 52.19 | 55.46 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 40.87 | 54.83 |
| KRH31657 | Soybean | nucleus | 47.3 | 54.6 |
| PGSC0003DMT400016511 | Potato | nucleus | 50.39 | 54.14 |
| CDX95313 | Canola | nucleus | 35.99 | 52.24 |
| PGSC0003DMT400041944 | Potato | nucleus | 46.02 | 52.03 |
| KRH35452 | Soybean | nucleus | 48.84 | 51.91 |
| CDX90626 | Canola | nucleus | 35.48 | 51.3 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 43.7 | 50.9 |
| CDY29054 | Canola | nucleus | 34.19 | 50.19 |
| Os10t0419300-00 | Rice | nucleus | 46.02 | 50.0 |
| Zm00001d032923_P002 | Maize | nucleus | 44.99 | 49.02 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 38.3 | 48.38 |
| EER94213 | Sorghum | nucleus | 44.47 | 47.79 |
| CDX90627 | Canola | nucleus | 35.22 | 47.74 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 43.19 | 47.73 |
| EER93298 | Sorghum | nucleus | 41.39 | 47.49 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 41.39 | 47.21 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 40.1 | 46.85 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 40.87 | 46.63 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 40.36 | 46.04 |
| EER95940 | Sorghum | nucleus | 43.96 | 45.97 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 43.96 | 45.97 |
| Zm00001d018941_P001 | Maize | nucleus | 43.96 | 45.6 |
| Os07t0178600-01 | Rice | nucleus | 43.44 | 45.43 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 40.1 | 45.35 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 42.67 | 45.11 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 41.39 | 44.97 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 41.65 | 44.51 |
| Os03t0161900-02 | Rice | nucleus | 43.19 | 44.33 |
| CDY14893 | Canola | nucleus | 29.82 | 44.27 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 39.33 | 43.97 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 39.07 | 43.93 |
| CDY11470 | Canola | nucleus | 31.62 | 43.16 |
| Zm00001d027757_P001 | Maize | nucleus | 42.42 | 42.97 |
| EER95463 | Sorghum | nucleus | 43.19 | 42.97 |
| CDX76693 | Canola | nucleus | 31.36 | 42.81 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 38.82 | 42.78 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 43.7 | 41.98 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 39.85 | 41.78 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 44.22 | 41.75 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 43.96 | 41.4 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 44.47 | 41.39 |
| CDY21503 | Canola | nucleus | 37.02 | 41.26 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 38.56 | 40.32 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 39.07 | 40.32 |
| EER90889 | Sorghum | nucleus | 38.3 | 40.16 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 40.36 | 39.55 |
| Zm00001d033987_P001 | Maize | nucleus | 37.53 | 39.35 |
| CDY43158 | Canola | nucleus | 30.85 | 39.22 |
| CDX83217 | Canola | nucleus | 37.53 | 39.14 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 39.85 | 35.8 |
| CDX78797 | Canola | nucleus | 37.79 | 34.19 |
| CDY60785 | Canola | nucleus | 38.05 | 33.87 |
| CDX93024 | Canola | nucleus | 24.68 | 31.37 |
| CDY13041 | Canola | nucleus | 24.68 | 31.27 |
| CDX77420 | Canola | nucleus | 25.19 | 31.21 |
| CDY50608 | Canola | nucleus | 25.19 | 31.11 |
| CDY38085 | Canola | nucleus | 34.96 | 30.98 |
| CDY39545 | Canola | nucleus | 24.94 | 30.89 |
| CDX85486 | Canola | nucleus | 34.96 | 30.77 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 39.85 | 29.75 |
| CDY09259 | Canola | nucleus | 27.51 | 29.56 |
| CDY58547 | Canola | nucleus | 34.45 | 29.52 |
| CDY23108 | Canola | nucleus | 25.71 | 29.41 |
| CDX93842 | Canola | nucleus | 36.76 | 29.36 |
| CDY01288 | Canola | nucleus | 37.02 | 29.27 |
| CDX76506 | Canola | nucleus | 27.51 | 29.23 |
| CDY16977 | Canola | nucleus | 32.39 | 28.57 |
| CDX92026 | Canola | nucleus | 32.9 | 28.57 |
| CDY28731 | Canola | nucleus | 31.62 | 28.21 |
| CDY69818 | Canola | nucleus | 28.28 | 28.21 |
| CDX74228 | Canola | nucleus | 32.9 | 28.13 |
| CDY01562 | Canola | nucleus | 28.02 | 27.74 |
| CDX69418 | Canola | nucleus | 34.19 | 27.31 |
| CDX99415 | Canola | nucleus | 26.74 | 27.08 |
| CDX70290 | Canola | nucleus | 24.94 | 26.72 |
| CDY10361 | Canola | nucleus | 26.74 | 25.94 |
| Zm00001d034433_P003 | Maize | nucleus | 41.39 | 25.93 |
| CDY44649 | Canola | nucleus | 28.53 | 23.37 |
| CDY12723 | Canola | nucleus | 27.51 | 22.53 |
| CDY01180 | Canola | nucleus | 27.25 | 22.22 |
| CDX78902 | Canola | nucleus | 25.96 | 19.54 |
| CDY43157 | Canola | cytosol | 2.57 | 11.11 |
| CDX84097 | Canola | nucleus | 6.68 | 9.67 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078FCJ3 | UniProt:A0A078FCJ3 | EnsemblPlants:CDY10674 | ProteinID:CDY10674 |
| ProteinID:CDY10674.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00048439001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF139 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EDE634 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
BnaA05g16880DBnaA05g16880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCJ3]
Coordinates
chrLK032005:+:574336..576495
Molecular Weight (calculated)
45065.6 Da
IEP (calculated)
4.619
GRAVY (calculated)
-0.865
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPSYRFIKE EFPTGFIVSP SPPSSSTYSY LYSTSMVPND PTTSSSPQPI EGLHESGPPP FLTKTYDLVE DSRTNHVVSW SQAKNSFIVW DPQAFSTTLL
101: PRFFKHNNFS SFVRQLNTYG FRKVNPDRWE FANEGFLRGQ KHLLKTIRRR KTSSNNQIQP PQSSSQEHSL DNCCIEVGRY GLDGEMDSLK RDKQVLVMEL
201: VKLRQQQQST KVYLKLIEEK LKKTESKQQQ MMSFLARAMQ NPDFLQQLME QKEKRKEMEE AISKKRQRPI DQGTRNVVTV EDYDDDDDGA YMKQEMYGDL
301: SGFEMSELDS LAMHIQGLGD QFTREEVLDV QKRDEEEEQE GYPKVNNEIY GEGFWEDMLN EGQNFDFEGV EENVDVLIEQ LGYLGSSSN
101: PRFFKHNNFS SFVRQLNTYG FRKVNPDRWE FANEGFLRGQ KHLLKTIRRR KTSSNNQIQP PQSSSQEHSL DNCCIEVGRY GLDGEMDSLK RDKQVLVMEL
201: VKLRQQQQST KVYLKLIEEK LKKTESKQQQ MMSFLARAMQ NPDFLQQLME QKEKRKEMEE AISKKRQRPI DQGTRNVVTV EDYDDDDDGA YMKQEMYGDL
301: SGFEMSELDS LAMHIQGLGD QFTREEVLDV QKRDEEEEQE GYPKVNNEIY GEGFWEDMLN EGQNFDFEGV EENVDVLIEQ LGYLGSSSN
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.