Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G278100.1 | Wheat | nucleus | 95.01 | 95.01 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 94.13 | 94.13 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 93.26 | 92.44 |
| Os03t0161900-02 | Rice | nucleus | 72.43 | 65.17 |
| EER95463 | Sorghum | nucleus | 68.33 | 59.59 |
| Zm00001d027757_P001 | Maize | nucleus | 65.98 | 58.59 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 61.29 | 57.42 |
| Solyc06g053960.2.1 | Tomato | nucleus | 22.87 | 54.93 |
| Bra012829.1-P | Field mustard | nucleus | 37.54 | 51.61 |
| CDX95313 | Canola | nucleus | 40.47 | 51.49 |
| AT3G51910.1 | Thale cress | nucleus | 41.06 | 51.47 |
| CDX90626 | Canola | nucleus | 39.59 | 50.19 |
| Bra012828.1-P | Field mustard | nucleus | 39.59 | 50.19 |
| CDY29054 | Canola | nucleus | 38.71 | 49.81 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 44.28 | 49.03 |
| KRH32059 | Soybean | nucleus | 47.8 | 47.8 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 48.68 | 47.7 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 46.33 | 47.45 |
| CDX90627 | Canola | nucleus | 39.88 | 47.39 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 48.97 | 46.26 |
| KRG95588 | Soybean | nucleus | 49.27 | 45.41 |
| KRH67266 | Soybean | nucleus | 50.73 | 44.82 |
| KRH31657 | Soybean | nucleus | 44.28 | 44.81 |
| Bra007739.1-P | Field mustard | nucleus | 37.24 | 44.56 |
| CDY11470 | Canola | nucleus | 37.24 | 44.56 |
| CDX94887 | Canola | nucleus | 35.19 | 44.44 |
| AT3G63350.1 | Thale cress | nucleus | 36.07 | 43.62 |
| CDX76693 | Canola | nucleus | 36.36 | 43.51 |
| KRG91367 | Soybean | nucleus | 46.04 | 42.9 |
| CDY34229 | Canola | nucleus | 47.51 | 42.74 |
| CDY14893 | Canola | nucleus | 32.55 | 42.37 |
| PGSC0003DMT400049793 | Potato | nucleus | 45.16 | 42.31 |
| PGSC0003DMT400049795 | Potato | nucleus | 44.57 | 42.22 |
| KRH35452 | Soybean | nucleus | 44.87 | 41.8 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 43.11 | 41.76 |
| Solyc09g065660.2.1 | Tomato | nucleus | 45.45 | 41.67 |
| Solyc09g082670.2.1 | Tomato | nucleus | 43.4 | 41.57 |
| CDY46607 | Canola | nucleus | 45.16 | 41.51 |
| AT5G43840.1 | Thale cress | nucleus | 34.31 | 41.49 |
| CDY10674 | Canola | nucleus | 47.21 | 41.39 |
| Bra035993.1-P | Field mustard | nucleus | 34.02 | 41.28 |
| CDY46606 | Canola | nucleus | 46.33 | 41.25 |
| PGSC0003DMT400016511 | Potato | nucleus | 43.4 | 40.88 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 45.16 | 40.85 |
| Bra023800.1-P | Field mustard | nucleus | 47.51 | 40.7 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 48.97 | 40.53 |
| CDY10311 | Canola | nucleus | 46.04 | 40.46 |
| CDX94884 | Canola | nucleus | 33.72 | 40.07 |
| Bra033913.1-P | Field mustard | nucleus | 47.51 | 39.8 |
| PGSC0003DMT400041944 | Potato | nucleus | 39.88 | 39.53 |
| AT3G22830.1 | Thale cress | nucleus | 46.92 | 39.41 |
| Bra001885.1-P | Field mustard | nucleus | 44.57 | 38.87 |
| CDX92958 | Canola | nucleus | 37.83 | 37.5 |
| TraesCS3D01G280600.1 | Wheat | nucleus | 24.63 | 34.85 |
| TraesCS7D01G367700.1 | Wheat | nucleus | 26.1 | 33.58 |
| TraesCS4D01G358900.1 | Wheat | nucleus | 26.98 | 33.33 |
| TraesCS3D01G385900.1 | Wheat | nucleus | 28.15 | 31.37 |
| TraesCS4D01G239600.1 | Wheat | nucleus | 34.31 | 30.47 |
| TraesCS3D01G386000.1 | Wheat | nucleus | 27.86 | 30.25 |
| TraesCS3D01G227200.1 | Wheat | nucleus | 26.69 | 28.35 |
| TraesCS5D01G553300.1 | Wheat | nucleus | 39.3 | 25.67 |
| TraesCS6D01G083800.1 | Wheat | nucleus | 33.14 | 24.67 |
| TraesCS2D01G211400.1 | Wheat | nucleus | 36.07 | 24.65 |
| TraesCS3D01G289000.1 | Wheat | nucleus | 25.81 | 21.15 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF201 | SMART:SM00415 | SUPFAM:SSF46785 | EnsemblPlantsGene:TraesCS4D01G276500 |
| EnsemblPlants:TraesCS4D01G276500.1 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4D:+:447639020..447641302
Molecular Weight (calculated)
39490.0 Da
IEP (calculated)
4.750
GRAVY (calculated)
-0.662
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRVLLPVRV KEEWPPPPPE EEEELEHGGL APRPMEGLHE TGPPPFLTKT FDLVADPATD GVVSWGRAGN SFVVWDPHLF AAVLLPRFFK HINFSSFVRQ
101: LNTYGFRKID PDRWEFANEG FIRGQRQLLK MIKRRRPLSY LPSPQHQALG SCLEVGQFGL DEEIEVLKRD KNALLEEVVK LRQEQQSSRA DMRAMEERLH
201: RVEQKQLQMM GFLARAIQNP DFFLQLIQQQ DKLKDLEDAY SNKRRRSIDV MPFLGPEGAS QSEPLESTFI FEDREFSELE NLAMNIQGIR KGMEGDRGGR
301: DQGCGEAELT DDFWEELLSE GMRDEAEMVE LERRRSRYVD A
101: LNTYGFRKID PDRWEFANEG FIRGQRQLLK MIKRRRPLSY LPSPQHQALG SCLEVGQFGL DEEIEVLKRD KNALLEEVVK LRQEQQSSRA DMRAMEERLH
201: RVEQKQLQMM GFLARAIQNP DFFLQLIQQQ DKLKDLEDAY SNKRRRSIDV MPFLGPEGAS QSEPLESTFI FEDREFSELE NLAMNIQGIR KGMEGDRGGR
301: DQGCGEAELT DDFWEELLSE GMRDEAEMVE LERRRSRYVD A
001: MMNPFLPEGC DPPPPPQPME GLHENAPPPF LTKTFEMVDD PNTDHIVSWN RGGTSFVVWD LHSFSTILLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
Arabidopsis Description
HSFA7AHeat stress transcription factor A-7a [Source:UniProtKB/Swiss-Prot;Acc:Q9SV12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.