Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90626 | Canola | nucleus | 96.98 | 95.54 |
| Bra012828.1-P | Field mustard | nucleus | 95.09 | 93.68 |
| CDX95313 | Canola | nucleus | 83.02 | 82.09 |
| CDX90627 | Canola | nucleus | 85.66 | 79.09 |
| AT3G51910.1 | Thale cress | nucleus | 75.47 | 73.53 |
| CDY11470 | Canola | nucleus | 60.75 | 56.49 |
| CDX76693 | Canola | nucleus | 60.75 | 56.49 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 56.23 | 41.27 |
| KRG95588 | Soybean | nucleus | 57.36 | 41.08 |
| KRH32059 | Soybean | nucleus | 52.83 | 41.06 |
| PGSC0003DMT400049795 | Potato | nucleus | 54.72 | 40.28 |
| PGSC0003DMT400049793 | Potato | nucleus | 55.09 | 40.11 |
| Solyc09g065660.2.1 | Tomato | nucleus | 56.23 | 40.05 |
| KRH67266 | Soybean | nucleus | 57.36 | 39.38 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 45.66 | 39.29 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 50.19 | 39.0 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 42.64 | 38.97 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 50.57 | 38.95 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 49.81 | 38.71 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 49.81 | 38.71 |
| Os10t0419300-00 | Rice | nucleus | 50.19 | 37.15 |
| Zm00001d032923_P002 | Maize | nucleus | 49.81 | 36.97 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 46.42 | 36.83 |
| EER94213 | Sorghum | nucleus | 50.19 | 36.74 |
| CDX94887 | Canola | nucleus | 36.98 | 36.3 |
| Zm00001d027757_P001 | Maize | nucleus | 50.94 | 35.16 |
| CDY14893 | Canola | nucleus | 34.72 | 35.11 |
| Os03t0161900-02 | Rice | nucleus | 50.19 | 35.09 |
| EER95463 | Sorghum | nucleus | 51.7 | 35.04 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 49.06 | 34.95 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 47.17 | 34.92 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 43.4 | 34.53 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 47.17 | 34.34 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 47.55 | 34.24 |
| CDY10674 | Canola | nucleus | 50.19 | 34.19 |
| CDY34229 | Canola | nucleus | 48.68 | 34.04 |
| CDX94884 | Canola | nucleus | 36.23 | 33.45 |
| CDY46607 | Canola | nucleus | 46.79 | 33.42 |
| CDY10311 | Canola | nucleus | 48.68 | 33.25 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 43.4 | 33.24 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 43.4 | 33.05 |
| EER93298 | Sorghum | nucleus | 42.26 | 33.04 |
| CDY21503 | Canola | nucleus | 43.4 | 32.95 |
| CDY46606 | Canola | nucleus | 47.55 | 32.9 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 43.77 | 32.86 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 44.53 | 31.81 |
| Zm00001d018941_P001 | Maize | nucleus | 44.91 | 31.73 |
| EER95940 | Sorghum | nucleus | 44.53 | 31.72 |
| Os07t0178600-01 | Rice | nucleus | 44.53 | 31.72 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 44.53 | 31.3 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 43.77 | 31.18 |
| EER90889 | Sorghum | nucleus | 43.4 | 31.0 |
| Zm00001d033987_P001 | Maize | nucleus | 43.4 | 31.0 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 47.17 | 30.86 |
| CDX83217 | Canola | nucleus | 42.64 | 30.29 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 47.55 | 30.14 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 46.79 | 30.1 |
| CDY43158 | Canola | nucleus | 34.72 | 30.07 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 46.79 | 30.02 |
| CDX92958 | Canola | nucleus | 38.11 | 29.36 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 43.77 | 29.22 |
| CDY13041 | Canola | nucleus | 30.94 | 26.71 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 43.4 | 26.56 |
| CDX93024 | Canola | nucleus | 29.43 | 25.49 |
| CDY39545 | Canola | nucleus | 30.19 | 25.48 |
| CDX77420 | Canola | nucleus | 30.19 | 25.48 |
| CDY50608 | Canola | nucleus | 30.19 | 25.4 |
| CDX70290 | Canola | nucleus | 34.72 | 25.34 |
| CDY09259 | Canola | nucleus | 34.34 | 25.14 |
| CDX78797 | Canola | nucleus | 40.75 | 25.12 |
| CDY60785 | Canola | nucleus | 41.13 | 24.94 |
| CDX76506 | Canola | nucleus | 34.34 | 24.86 |
| CDY23108 | Canola | nucleus | 30.94 | 24.12 |
| CDY69818 | Canola | nucleus | 35.09 | 23.85 |
| CDX99415 | Canola | nucleus | 34.34 | 23.7 |
| CDY10361 | Canola | nucleus | 35.85 | 23.69 |
| CDX92026 | Canola | nucleus | 39.62 | 23.44 |
| CDY01562 | Canola | nucleus | 34.72 | 23.41 |
| CDX85486 | Canola | nucleus | 38.49 | 23.08 |
| CDY38085 | Canola | nucleus | 38.11 | 23.01 |
| CDY58547 | Canola | nucleus | 38.87 | 22.69 |
| CDY16977 | Canola | nucleus | 37.74 | 22.68 |
| CDY28731 | Canola | nucleus | 36.6 | 22.25 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 43.4 | 22.07 |
| CDX74228 | Canola | nucleus | 37.74 | 21.98 |
| CDX93842 | Canola | nucleus | 39.62 | 21.56 |
| CDY01288 | Canola | nucleus | 39.62 | 21.34 |
| CDX69418 | Canola | nucleus | 38.49 | 20.94 |
| CDY12723 | Canola | nucleus | 35.09 | 19.58 |
| CDY01180 | Canola | nucleus | 34.34 | 19.08 |
| CDY44649 | Canola | nucleus | 33.96 | 18.95 |
| Zm00001d034433_P003 | Maize | nucleus | 41.89 | 17.87 |
| CDX78902 | Canola | nucleus | 33.58 | 17.21 |
| CDX84097 | Canola | nucleus | 5.28 | 5.2 |
| CDY43157 | Canola | cytosol | 1.51 | 4.44 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078GVA1 | UniProt:A0A078GVA1 | EnsemblPlants:CDY29054 | ProteinID:CDY29054 |
| ProteinID:CDY29054.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00041793001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF260 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EEFB35 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
BnaC07g32600DBnaC07g32600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVA1]
Coordinates
chrLK032229:+:378935..380257
Molecular Weight (calculated)
30963.0 Da
IEP (calculated)
5.693
GRAVY (calculated)
-0.551
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPFLHREND PPLSPPKPVE GLHEIGPPPF LIKTFEIVED PNTDHIVSWN RGGTSFVVWD LHSFSEFLLP RHFKHSNFSS FVRQLNTYGF RKIEAERWEF
101: ANEGFLLGQR HLLKSIKRRA SFASSIQDPC VQLLKEKQLL SMELASLRQQ QQTARIYIKS MEQRIEGAEK KQRMMMSFLA RALQGPTFLY QLLQERDMRF
201: KEVEVEERER GSSVSELEAL ALEMQGYGRQ RNVKEEEDMV VERELDDGFW EELLSNESLA STSIL
101: ANEGFLLGQR HLLKSIKRRA SFASSIQDPC VQLLKEKQLL SMELASLRQQ QQTARIYIKS MEQRIEGAEK KQRMMMSFLA RALQGPTFLY QLLQERDMRF
201: KEVEVEERER GSSVSELEAL ALEMQGYGRQ RNVKEEEDMV VERELDDGFW EELLSNESLA STSIL
001: MMNPFLPEGC DPPPPPQPME GLHENAPPPF LTKTFEMVDD PNTDHIVSWN RGGTSFVVWD LHSFSTILLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
Arabidopsis Description
HSFA7AHeat stress transcription factor A-7a [Source:UniProtKB/Swiss-Prot;Acc:Q9SV12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.