Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- nucleus 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G445100.1 | Wheat | nucleus | 63.15 | 94.54 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 62.57 | 94.22 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 63.34 | 93.48 |
| EER93298 | Sorghum | nucleus | 51.25 | 78.76 |
| Solyc06g053960.2.1 | Tomato | nucleus | 14.97 | 54.93 |
| HORVU7Hr1G034320.1 | Barley | nucleus, plastid | 14.01 | 54.48 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 42.61 | 53.11 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 31.86 | 48.26 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 33.21 | 47.92 |
| AT3G51910.1 | Thale cress | nucleus | 24.76 | 47.43 |
| KRG95588 | Soybean | nucleus | 33.59 | 47.3 |
| HORVU7Hr1G055320.1 | Barley | mitochondrion, nucleus | 14.59 | 46.91 |
| KRH31657 | Soybean | nucleus | 30.33 | 46.88 |
| Bra012829.1-P | Field mustard | nucleus | 22.26 | 46.77 |
| CDX95313 | Canola | nucleus | 23.99 | 46.64 |
| KRH32059 | Soybean | nucleus | 30.52 | 46.63 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 33.21 | 46.51 |
| KRH67266 | Soybean | nucleus | 33.97 | 45.85 |
| PGSC0003DMT400049793 | Potato | nucleus | 31.67 | 45.33 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 32.05 | 45.01 |
| KRG91367 | Soybean | nucleus | 31.48 | 44.81 |
| PGSC0003DMT400049795 | Potato | nucleus | 30.52 | 44.17 |
| Solyc09g065660.2.1 | Tomato | nucleus | 31.48 | 44.09 |
| HORVU2Hr1G043030.1 | Barley | nucleus | 13.05 | 43.87 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 29.56 | 43.75 |
| Zm00001d034433_P003 | Maize | nucleus | 52.02 | 43.64 |
| CDX90626 | Canola | nucleus | 22.46 | 43.49 |
| Bra012828.1-P | Field mustard | nucleus | 22.46 | 43.49 |
| KRH35452 | Soybean | nucleus | 30.52 | 43.44 |
| CDY29054 | Canola | nucleus | 22.07 | 43.4 |
| Solyc09g082670.2.1 | Tomato | nucleus | 28.98 | 42.42 |
| CDX90627 | Canola | nucleus | 23.22 | 42.16 |
| PGSC0003DMT400041944 | Potato | nucleus | 27.64 | 41.86 |
| PGSC0003DMT400016511 | Potato | nucleus | 28.98 | 41.71 |
| CDY34229 | Canola | nucleus | 29.75 | 40.9 |
| CDY14893 | Canola | nucleus | 20.35 | 40.46 |
| AT3G63350.1 | Thale cress | nucleus | 21.69 | 40.07 |
| CDY11470 | Canola | nucleus | 21.88 | 40.0 |
| Bra007739.1-P | Field mustard | nucleus | 21.88 | 40.0 |
| AT3G22830.1 | Thale cress | nucleus | 31.09 | 39.9 |
| CDY10674 | Canola | nucleus | 29.75 | 39.85 |
| AT5G43840.1 | Thale cress | nucleus | 21.5 | 39.72 |
| CDY46606 | Canola | nucleus | 29.17 | 39.69 |
| CDX94887 | Canola | nucleus | 20.54 | 39.63 |
| Bra035993.1-P | Field mustard | nucleus | 21.31 | 39.5 |
| Bra023800.1-P | Field mustard | nucleus | 29.94 | 39.2 |
| CDY46607 | Canola | nucleus | 27.83 | 39.08 |
| CDX76693 | Canola | nucleus | 21.31 | 38.95 |
| CDY10311 | Canola | nucleus | 28.79 | 38.66 |
| Bra033913.1-P | Field mustard | nucleus | 29.94 | 38.33 |
| Bra001885.1-P | Field mustard | nucleus | 27.64 | 36.83 |
| HORVU7Hr1G119990.1 | Barley | nucleus | 17.08 | 36.63 |
| HORVU7Hr1G088920.3 | Barley | nucleus | 18.62 | 36.47 |
| CDX94884 | Canola | nucleus | 19.96 | 36.24 |
| CDX92958 | Canola | nucleus | 22.26 | 33.72 |
| HORVU4Hr1G090090.4 | Barley | nucleus, plastid | 19.19 | 33.67 |
| HORVU3Hr1G088890.2 | Barley | nucleus | 18.04 | 32.53 |
| HORVU7Hr1G087690.1 | Barley | nucleus | 22.65 | 32.33 |
| HORVU4Hr1G090850.1 | Barley | nucleus | 19.96 | 30.95 |
| HORVU3Hr1G055960.1 | Barley | nucleus | 19.39 | 30.89 |
| HORVU5Hr1G123770.1 | Barley | nucleus | 31.67 | 28.75 |
| HORVU0Hr1G008940.2 | Barley | cytosol, nucleus | 15.74 | 27.99 |
| HORVU6Hr1G017910.1 | Barley | nucleus | 22.84 | 26.04 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 20.35 | 24.59 |
| HORVU3Hr1G069590.4 | Barley | nucleus, plastid | 10.75 | 23.63 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 19.19 | 23.15 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | UniProt:A0A287SLI0 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU5Hr1G105770 | EnsemblPlants:HORVU5Hr1G105770.2 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF139 |
| SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI000B4672B4 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:622147282..622152597
Molecular Weight (calculated)
58069.3 Da
IEP (calculated)
10.381
GRAVY (calculated)
-0.650
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPISLCDAR VASLSCLIGR IIPAPTRPPH NRFRGVAYSH AHRFQNLPLH PQPKRPLLRL LPNPHHLPTT LPSPPRPPPP PPPSCAAHPV SLRDPIPVPG
101: ARRSPRGDHA RQVFVSVPRH GPIPPPFGHA HTVPIRATSR LARARREPPS RLWCRKARPS AMGSAAAMSH RMMNPVKVEG RPSPSPSPTA AAGGGGGAPR
201: PMDGLADAGP TPFLAKTYDM VDDPTTDAVV SWSATNNSFV VWDPHLFGTV LLPRYFKHNN FSSFVRQLNT YGFRKVDPDR WEFANEGFLR GQRHLLRNIK
301: RRKPTHGSQN QQSLGSYLEV GNFGHDVEID QLKRDKQLLM AEVVKLRQEQ QNTRSDLQAM EKRLQGTEQK QQQMMSFLAR VMQNPLFIRQ LISQSEMRKE
401: LEDAISNKRR RRIDQGPEAV DSMGTGSTLE QGSHVMFEQQ EPVDSFVNGV ISDLESSSVD TKGAEVQQSV ASSRSEQLRG RPSGELNDDF WEDLLHEGGL
501: GEEASNLVVP DDMNLLAQEM H
101: ARRSPRGDHA RQVFVSVPRH GPIPPPFGHA HTVPIRATSR LARARREPPS RLWCRKARPS AMGSAAAMSH RMMNPVKVEG RPSPSPSPTA AAGGGGGAPR
201: PMDGLADAGP TPFLAKTYDM VDDPTTDAVV SWSATNNSFV VWDPHLFGTV LLPRYFKHNN FSSFVRQLNT YGFRKVDPDR WEFANEGFLR GQRHLLRNIK
301: RRKPTHGSQN QQSLGSYLEV GNFGHDVEID QLKRDKQLLM AEVVKLRQEQ QNTRSDLQAM EKRLQGTEQK QQQMMSFLAR VMQNPLFIRQ LISQSEMRKE
401: LEDAISNKRR RRIDQGPEAV DSMGTGSTLE QGSHVMFEQQ EPVDSFVNGV ISDLESSSVD TKGAEVQQSV ASSRSEQLRG RPSGELNDDF WEDLLHEGGL
501: GEEASNLVVP DDMNLLAQEM H
001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SR
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SR
Arabidopsis Description
HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.