Factsheet for HORVU7Hr1G087690.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G087690.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26150.1	HORVU7Hr1G087690.1	AT2G26150.1	21510947

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G267300.1	Wheat	nucleus	86.03	88.95
TraesCS7A01G360400.1	Wheat	nucleus	86.3	87.99
Os06t0565200-00	Rice	nucleus	57.81	63.75
Zm00001d046204_P001	Maize	nucleus	53.97	53.97
HORVU7Hr1G034320.1	Barley	nucleus, plastid	19.18	52.24
KXG20211	Sorghum	nucleus	54.79	47.96
HORVU7Hr1G055320.1	Barley	mitochondrion, nucleus	21.1	47.53
HORVU2Hr1G043030.1	Barley	nucleus	18.9	44.52
GSMUA_Achr2P16660_001	Banana	nucleus	33.15	44.32
GSMUA_Achr6P00960_001	Banana	nucleus	37.53	43.77
KRH05436	Soybean	nucleus	36.16	37.18
HORVU7Hr1G119990.1	Barley	nucleus	24.38	36.63
VIT_04s0008g01110.t01	Wine grape	nucleus	37.81	35.57
KRH15573	Soybean	nucleus	35.34	35.44
CDY21503	Canola	nucleus	33.15	34.67
HORVU4Hr1G073650.2	Barley	nucleus	32.6	34.59
PGSC0003DMT400021234	Potato	nucleus	33.42	34.56
Bra000557.1-P	Field mustard	nucleus	32.88	34.48
HORVU4Hr1G090090.4	Barley	nucleus, plastid	27.95	34.34
AT2G26150.1	Thale cress	nucleus	32.33	34.2
KRH61515	Soybean	nucleus	34.52	33.87
CDX83217	Canola	nucleus	34.25	33.51
HORVU7Hr1G088920.3	Barley	nucleus	23.56	32.33
HORVU1Hr1G083420.2	Barley	nucleus	32.88	32.26
HORVU5Hr1G094380.1	Barley	nucleus	31.23	30.73
HORVU3Hr1G088890.2	Barley	nucleus	24.11	30.45
HORVU4Hr1G090850.1	Barley	nucleus	27.67	30.06
HORVU2Hr1G014590.1	Barley	nucleus	33.42	29.19
HORVU3Hr1G055960.1	Barley	nucleus	24.93	27.83
HORVU5Hr1G105770.2	Barley	nucleus	32.33	22.65
HORVU6Hr1G017910.1	Barley	nucleus	27.67	22.1
HORVU3Hr1G069590.4	Barley	nucleus, plastid	13.97	21.52
HORVU1Hr1G081300.1	Barley	nucleus	23.84	20.19
HORVU5Hr1G123770.1	Barley	nucleus	30.41	19.34
HORVU3Hr1G071550.3	Barley	nucleus	22.74	19.21
HORVU0Hr1G008940.2	Barley	cytosol, nucleus	14.52	18.09

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	UniProt:A0A287X7A7	ncoils:Coil	GO:GO:0001666	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628	GO:GO:0009644	GO:GO:0009719
GO:GO:0009987	GO:GO:0010200	GO:GO:0010286	GO:GO:0034605	GO:GO:0034620	GO:GO:0042542
GO:GO:0043565	GO:GO:0044212	GO:GO:0045893	GO:GO:0071456	EnsemblPlantsGene:HORVU7Hr1G087690	EnsemblPlants:HORVU7Hr1G087690.1
InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434
PANTHER:PTHR10015	PANTHER:PTHR10015:SF259	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000B472A0E	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:528582587..528584686

Molecular Weight (calculated)

39687.6 Da

IEP (calculated)

4.633

GRAVY (calculated)

-0.421

Length

365 amino acids

Sequence
(BLAST)

001: TSLTNEHLHQ LRSSKMDSAA AMTMDIKQEE PEMMVLDDDD DDAGCCLAPT PLDLAAAAAV APFLAKTFDM VEDPATDAVV SWGAARNSFV VWDPHAFAAG
101: LLPLHFKHAN FSSFLRQLNT YGFRKVNPDR WEFANAGFLG GQRHLLAGIR RRRGADTGRR PAAALSPSSC AEGAGGFGSV EGELERLRQD REALKRELAG
201: LKRQQEEARA TLLDMERRVE GTERRQEQCK AFLARAVRNP AFLANLARRN DLAAAAPAPA VDGKKKRRRL DAIPSPLPAE DGFTFQELAL AAGVVEEAAA
301: PTQGSGAGGV TTDMIWYELL EEGQAEIDVE VEDLVAAAGD MAPWEFGEEE DPDDGVCRDA RRGRE

Best Arabidopsis Sequence Match ( AT1G32330.1 )
(BLAST)

001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP

Arabidopsis Description

HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.